Solanum verrucosum: 125818676
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Entry
125818676 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125818676
KO
K14794
ribosomal RNA-processing protein 12
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sver03009
]
125818676
Ribosome biogenesis [BR:
sver03009
]
Eukaryotic type
90S particles
Other 90S particles
125818676
Pre-60S particles
Other pre-60S particles
125818676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
TOR1L1_N
DUF3730
HEAT_Maestro
HEAT_EF3_N
SAMP
Motif
Other DBs
NCBI-GeneID:
125818676
NCBI-ProteinID:
XP_049354144
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MDPQDNNNVFNDNSDICQQLLQRYGKSSAPQHRHLCAIAAATRSIIQAESLPITPFSYFA
ATISTISNSQESLDPQALSGLSSFLSIVLPLVHNEDVSSDKVAEAIEFLVGLLEKETVES
EGGLGTSTVRAFVKCLGVLIGFCDKEDWDSVKVGFEILVKFAIDKRPKVRKCAHDCILTV
FKSFGSSSVAKKAGERIYSLIKGNIALAMKLSDPKEISGSKDEHQEVLHSLNILKPIIPY
LRVKDNEKVLAQLVELMRSQSSAFTRHIFDNIGAILDVSKIEIILLEADTIIKALISYML
SAETPADNVLFAATLAKGIIDKLHDDGMSAWVTYLPLVVGSISGLLTRPENIALPASNIL
KEMINAHIDVKKFLTGKKQAVDDEALSSSEFETVKAICLVFENVLLSSSEYPNDHILAVL
SVMFLKLGEALDFCAKDIILKLADWMIVASGDAAYDTKNLQECIGSAVIAMGPEKLLALL
PISLITMDYSFSNSWLVPVLNKYICGSSLEFFMKHVVPLAVSFEQASCKVKKSVIREELL
AYARECWGLLPAFCRCPSDVHKNAQALTTLLIPFLKEDSFMLENISAALQELVNKNKNAL
ASDNFSGEHIVHQTENENLDLALEFKRKCSYSKKSSSKNIKALASCSEEWLRALINVFFK
ASPANYQQFKEAIGCLTSITDSSLTQRIFTSSMERTGITNEIGEYKKLGLHSTDNKENNS
TLLGEVAKRCIILELGSCFVEGSGEDLIKVLFGIARDVLETTHGAGHLEAYHILSRILEK
HSWFHSSHAEQLMDLLARVRPPTDTKTLTSRFAFYKTLLIDALQGNDEENTQAFLILNEI
ILALKDSTEEGRKTAYDALIGVCSSLRDSSSAKSDESYKKFVDMIIAYLSGSSPHIKSGA
VSALSVLVYSDVNICLSVPDLVPSVLTLLQSKDVEVTKAVLGFVKVFVSSIQANDLHNLL
SDIVNGVLPWSSVSRHHFRSKVTVIVEILMRKCGVAAVKSVAAEKYKNFLKTVSENRHGK
SSSKEDGSAEMESTPSDSRWQHKRKDRESSDSFKEKNSRGPHKRMKRKEGEKDSSTNFTK
KGFMGGKARNSEMKRKNNTTDEPYRKLVNRTKEFGRRKQEGSKTPPQKRDNGGKLKREGF
RGKGKIDRQKRPADGTRGPGANRRQKTNKNS
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcaagacaacaacaatgtcttcaatgacaattccgacatatgccaacaactc
ctccaacgttacggaaaatcctcagcaccccaacatcgtcatctctgtgctattgcagcc
gccactcgttccattatacaagctgagtctttaccaataacccctttttcttacttcgcc
gccacaatttccacaatttcaaattctcaagaatctcttgacccacaagctttatctggg
ttgtcttcctttttgtctattgttcttccattagttcacaatgaagatgtttcttcagat
aaagttgctgaggcaattgagtttcttgtgggtcttcttgaaaaggagacagtggagagt
gagggtggtttggggacttctactgtgagggcttttgttaagtgtttgggggttttaatt
gggttttgtgataaggaagattgggattctgtgaaagtggggtttgagatacttgtgaag
ttcgccattgataagcgtccaaaggtgaggaaatgtgctcatgattgtattctgactgtt
tttaagtcatttggttcatcttctgtggctaagaaggctggtgaaagaatttactccttg
ataaaaggtaacattgcattggcaatgaaacttagtgatccaaaggaaataagtggatct
aaagatgagcatcaagaggtgcttcactccctgaatatcctgaagcctatcatcccgtat
cttagagtcaaagacaatgagaaggtacttgctcaactagtggagcttatgaggtcccaa
agctcagcattcacaagacacatttttgataatattggggcgatattagatgtttcaaag
attgaaatcattcttctagaagctgacactattataaaagctcttatttcatacatgttg
tctgcggagacccctgctgacaatgtattgtttgccgcaactttagcaaaaggcatcatc
gacaaactccatgatgacggaatgagtgcttgggttacctatttgcctttggttgtcggc
tccatatcaggtcttcttacacgtccagaaaatatcgctttaccggcttcaaatattttg
aaagaaatgatcaatgctcatattgatgtgaaaaagtttttgaccggtaaaaagcaggca
gtggatgatgaggctctcagctcttctgaatttgaaactgtgaaagctatttgcttagtc
tttgaaaacgtgcttctcagctcttctgaatacccaaacgaccatatactggcagtcctg
tctgtcatgttccttaaattgggtgaggctttggacttctgtgcaaaggatataatactt
aaacttgctgattggatgattgttgcttctggggatgctgcttatgatacaaaaaatctt
caggagtgcataggatcagctgttattgctatgggaccagagaaactgcttgccctgtta
cccatctccctgattacgatggattactctttttcaaacagttggttggttcctgtttta
aataaatatatatgtggatcatcacttgagttctttatgaagcacgtggtgccacttgct
gtgtccttcgaacaggcatcgtgtaaagttaaaaagtcagtaattcgagaagaacttctg
gcttatgcccgtgagtgttggggactattacctgccttttgtcgctgtccatctgacgtt
cacaagaatgcccaagctttgactacacttttgattccttttctgaaggaggactccttt
atgcttgagaatatttctgcagctttgcaggaactggtgaataagaataaaaatgcactt
gcatctgataacttttctggagagcatatagttcaccaaacggagaacgaaaatcttgat
ttggcattggagttcaaacgcaaatgctcttactcaaagaagtcttctagcaaaaatatt
aaggctttggcatcttgctctgaggaatggctccgggctttaattaatgtcttttttaag
gcatctcctgcaaattaccagcagttcaaggaggcaatagggtgcttgacttccatcact
gattcttcgttaacccaaaggatttttacttcttcaatggagagaactgggattacaaac
gaaattggtgaatacaagaaacttggacttcattcaacagacaataaagaaaataactcc
actcttcttggggaagtagctaagaggtgcattatcttggagttgggatcatgctttgtt
gaaggatctggcgaggatctcattaaagtcctctttggtattgctagggatgttttggag
actactcatggagctggtcatcttgaagcatatcacattctaagtagaatattagagaaa
cattcctggtttcactcttcacatgctgagcagctgatggatttgttagctagggtgagg
cctccaactgatacaaaaacacttacaagtcgctttgccttctacaaaaccttgttgatt
gatgcattacagggtaatgacgaggaaaacacccaggcctttctcattctgaatgagatt
attctcgcattaaaagattccacagaagaaggtagaaagacagcatatgatgcccttatc
ggtgtgtgttctagcttgagagactcttcatcggctaagtcggatgaatcttataagaag
ttcgttgatatgattatagcttatctttctggttcatcaccgcatataaaaagtggagca
gtctctgccctttctgttctggtttatagtgatgtcaatatctgtctctcagtccctgat
ctggtcccttctgttctgactctactgcagagtaaagatgtcgaagttacaaaagctgtt
ctgggatttgttaaagtatttgtatctagtattcaagcaaatgacctgcataatttgctt
tcagacattgtcaacggagtgctaccttggtcatctgtgtcacgccatcattttagatca
aaggtcaccgtaatcgtggagatcttgatgaggaagtgtggagttgctgcagttaagtca
gttgcagctgagaagtacaaaaatttcctcaagacagtctcagagaatcgccatggcaag
tcaagctctaaagaagatggtagtgctgagatggaatcaactccttcggattcaaggtgg
cagcataaaaggaaggatagagaatctagtgactcattcaaggaaaagaattccagggga
cctcacaaaagaatgaagagaaaggagggtgaaaaagattcatccacaaattttaccaag
aaaggattcatgggaggtaaagcaaggaatagcgagatgaaaaggaagaacaacactacc
gatgaaccttataggaagctggttaacagaaccaaagaatttggacgtcgcaaacaggaa
ggtagtaaaacaccaccacagaagagagataacggagggaaattgaagagggagggtttc
cgggggaagggaaagatagacaggcaaaaaaggccagctgatggtacacgaggtccaggt
gctaatagacgacagaaaactaacaaaaacagctag
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