Solanum verrucosum: 125819064
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Entry
125819064 CDS
T11474
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sver Solanum verrucosum
Pathway
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125819064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125819064
Spliceosome [BR:
sver03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125819064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
DUF4060
Motif
Other DBs
NCBI-GeneID:
125819064
NCBI-ProteinID:
XP_049354531
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MAELKTSGRPIDQLLEKVLCMNILSSDYFRDLLRLKTYHEVIDEIYNQVDHVEPWMTGNC
RGPSTAFCLLYKFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYLGDFKTLWGWYEPYL
KDDEEFSPGSSGQMTTMGVYVRDLFLGQYYFDTLLPRIPVPVVRTAVASLEKMNLPTKLS
GSIGDSSRGSEETSRRPPSVKASLSVSFGQRAPHRASTRDSSPIRRTIAPPPYDKDGANG
SRRSPSMRRSQSRDLSDRENSERDRGRDRDRDNERTRDRERDRDRDRYRDQERERDRGRD
RDKDRRYDHERDRERDRDRRHDYDRDRGRDRDRRYDYDRRSIERSRRDYERSRSRSRSRS
HSRSLHDQGTSLDQQRTPPRDESKEKKAASSNLAKLKDLYGDFGNKKENVGDGRAPNRDT
STEEVIRLGGSTWR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcttaagacttctgggagacctattgaccaattgttggagaaggttctctgc
atgaacattctatcttctgattacttcagagacctattgcggctgaaaacttatcatgaa
gtgattgatgaaatctataatcaagttgatcatgtggaaccatggatgactggcaactgt
cgtggtccttcaacagccttctgccttctctacaagttctttacaatgaaacttactgtc
aagcaaatgcatggcctgttaaagcatccagattctccttacattagagctattggattc
ctttatctgagatatcttggtgattttaagacattatggggttggtatgaaccttacctc
aaagatgatgaggaattctctcctggatccagtggccaaatgaccacaatgggcgtatat
gtgcgtgacttatttctcgggcagtattattttgacacactactaccccgcattcctgtt
cctgtcgtgcggacggcagttgccagtctcgaaaaaatgaatctgccgaccaaactctct
gggtcgatcggtgactctagtcgtggatctgaggaaacttctcgccggccaccttctgtc
aaagcctccctttcagtgtcctttggccagcgcgcacctcatcgtgcatcaactagagat
tcatctcccatccgacgaacaattgcaccaccaccatatgataaggatggtgcaaatggt
tcaagacgttcccccagcatgcgccggagtcaaagtcgtgatttatctgaccgagaaaat
tctgaaagagacagaggccgggacagagacagggacaatgaaagaactagggacagagaa
cgtgatagggatagggataggtatagggaccaggaaagagaaagggataggggcagggat
cgggataaagatagaaggtatgatcacgaaagagatcgtgaaagggacagagacaggagg
catgattatgacagagaccggggaagggatagagacaggaggtatgattatgatcgaagg
tcaattgagagaagcagaagagactatgagaggagcaggagccgtagtaggagtagaagc
cacagccgaagcttgcatgatcaaggtacaagtcttgatcagcagcgaactccacctagg
gatgagagcaaggagaagaaggctgcatctagcaatctggccaagcttaaagatctatat
ggcgacttcggcaataaaaaggagaacgtaggtgacggcagggctccaaatagggataca
agtactgaggaggttatcagacttggtggttctacatggaggtag
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