Solanum verrucosum: 125819154
Help
Entry
125819154 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125819154 isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
sver Solanum verrucosum
Pathway
sver03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125819154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125819154
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125819154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
125819154
NCBI-ProteinID:
XP_049354622
LinkDB
All DBs
Position
Unknown
AA seq
1981 aa
AA seq
DB search
MATTTEANDEASRRSTTKIVDASLWWDPFPHLLAELESVSPSSDLPPPLEKKIKVNHAWF
LDTVSLFKPPNLKSREALDASRLKIGLHQITVEADKKEAALKISSALCLDEVQSYILVDR
TINQKSIVADGVFHELPHLVMLQYYLERQCLMKCTRHIIMQALYIATRSQDSFIVDEAQK
LISDGLDRKFFSVLQENLHSNFPENMDVDLYTLWAEEIVIEDNLVLDVLFLIFYEFCPCT
GELWKKLCSLYEGFISNSYNFGKLAVSAEAVSSIYHAKLQLLLILIETLDLENLLQMVHD
ETPFRQGYVTFSLSEVEEIDAMVSTFDVFENNESGPLVLAWAVFLCLISSLPGKEENNKL
MEIDHIGYVRQAFEAGSLSSFLEIIENDILRDFDFFQGPITGFRSVLRTFLSAFIASYEI
NLQLEDGNLKLILDILCKIYQGEESLCTQFWDRESFVDGPIRCLLCSLEGEFPFRTAELL
QLLTALCEGAWPAECVFNFLDKSTGLSSPVDISSCAIVNDASQTVMVVQPLHLPGIEGLV
IPSGTCGHLLKMIDRDIALVRWEFPQSGIVVLLLRLAQGLYLEKTSEIVMTLGFLSRLVT
FNMGVCYSLLNLGGYMHDEMNSPTEHLRINVAEIICAWIKNLSPNCSGVALMSMGVNILA
KMLKCSPYHVSRLIVQANIFDVAFKTNPFKVDSNGLSSGSWLLSGRLAKMLLIDCEQNDC
QLTLSVLDFTMQLMDSGMENDVVLALVIFSIQYVLVNHEFWNYKIKHTRWKVTLKVLEVL
KKCILSISYIQKLGEVVKDILFGDSSIHNALFRLVCTTSDGLEKLYFSRLYGLTDIEGLQ
QAIVLGLDILSSMLSDLSRVVPTFTVFCQAVMSLTAKPVPVVTAVISLMSFFRNPKIQVG
AARLLSRLFIIGDDSQSYALSNVYFGLDDKQIYNFKNTICSILCQEKVESEDLIIATFKM
LTSAARYQASFLTAVIALEENSISESCNGDNHPANNDALQCNAANILDCIWIYVKRSDDL
VMTKSRIMCNVLNFLKALWQGAAHYTNLLKQLRNSDFWEKLLISAVLSISKKSCQSDSTT
ELELQNLAYRYQCQHNVLDVVACEMILQKKILHSELVTKESSKCLHNGSDGCKVATAESS
CNLKEIFGAWCGSSLDAETIKTFVSFEYDDSVKLRARVAAGLFAVRIMCKVKGGDRGSLS
VSLVDKVTNLWEKLRKLPAFSELMAIYTKHGYSGGNELDDLILNDLFYHLQGELEGRHIS
HMPFKELSQYLLQSNFLQTYQRKHHEDIFPQTDGVCLYDTDRLQGDMAIDLWDLSDWKAS
KVVAEMLLLSLQNVNVMVSLTTSKLSALIALATTFSISDNDNVSFASLDNEVRSGRKIPE
KSLSSSIDNICQSLHRTIELLPPVSDASEDIVDILAAQAELLFHFTRSLSTHLSLSTCLL
ILKTSGYGLKVLCNCRPLVTGVFYPMKIFLMLVLFSLKSSWRDSRLGVQTKIEHNEALPE
AANVSLGLLPLICNCIELNEHCSLSVIITDQIIKGFSTPATWFPIIQKHLPMQRIVLKLQ
DKSSYSNIGILLKFLLTIAHVKEGAEMLVKTGFFASLSVLLADLSNGRPLSVVERERNLA
NTFENIERAQPIWGLSLAVVTAIINSLGESSIFNVEHVVTYFLLEKADLISYYLSAPDFP
PDDHDKKRLRALKPHTSLSALREIENTVMLICVLAKHRNTWSRAMKEMESQLRERCIHLL
AFISCGTPRHGESPGRVPPIFCHPTLREEYEWHKKPSSISSKNGWFAFSAYCCSLNPKYS
SFSSRTATLIKDQPNEHANLTSQTHFSDAMSIQIYRITSLLLKFLCQQAEDAAARAEEVG
FVDLAHFPELPMPDILHCLQDQGITIVTELCEANKLKQVTSEIQGVCILLLQITVMALYL
EFCVIQICGMRPVHGHVEDFSKEFYALTKAMEGHTFLKESMNSLKQMVSFVYPELLQAED
V
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
atggccacaactacagaagctaatgatgaagcttcaagaagaagcaccaccaagattgtt
gatgcttcgctttggtgggaccccttcccacacttgctcgctgaactcgaatctgtttct
ccctcctctgacctccctcctcctctggagaagaagataaaggtaaatcatgcatggttt
ctggacacagtttcactatttaagccaccaaacctgaaatcaagggaggctttagatgcc
agccgactgaagattggtctacaccagattactgtagaagctgataaaaaagaagcagcc
ttgaaaattagttctgctttgtgtttggatgaggtgcagtcatatattcttgttgataga
accattaatcaaaaaagtatcgttgctgatggtgtatttcacgagcttcctcatttggtt
atgcttcagtattatttggaacgccaatgtttaatgaagtgcacacgccatataattatg
caagctttatatatcgcgacaagatctcaagattcgtttattgtagatgaggcacagaaa
ttgatttctgatggactggacaggaaattcttttctgtcctgcaggagaatctacactct
aactttcctgagaacatggatgttgacctttatactttgtgggctgaagaaatagtaatt
gaagacaatcttgtattggatgttcttttcctcatattttacgagttctgcccctgcacg
ggtgaactgtggaaaaaattgtgctcactttatgagggattcatttcaaattcttataat
tttgggaagttggctgtatctgctgaagcagtttcctctatttatcatgccaaactgcag
ctgctgcttatcctcatagaaactttggatttggaaaatcttttgcagatggttcatgat
gaaactccgttcaggcagggttatgttactttttctttgtcggaggtggaagaaattgat
gctatggtgtccacttttgatgttttcgaaaacaatgaatcgggaccattggttttggca
tgggcagtgtttctctgtctaatttcatctcttccaggaaaagaagaaaacaataaactg
atggagatcgatcatattggttatgtccgccaagcttttgaagctggatcattgagttct
tttcttgaaattattgaaaatgatatactgagggattttgatttttttcagggtcctatt
actggttttagaagtgttttgcggacatttttatcagcatttattgcatcttatgagatc
aatctccagctggaggatggtaacctgaaattgatattggatattctttgcaaaatttat
caaggggaggagtccctctgtactcagttttgggatagggaaagttttgttgatggtcct
atcaggtgccttctttgcagcttggagggtgaattcccatttagaactgctgagctttta
cagttgttaactgcactttgtgaaggagcgtggcctgcggaatgtgtatttaattttctc
gacaagtccactggattgtcatctcctgttgacatcagtagctgtgcaattgtgaatgat
gcttctcagactgttatggtggtccaaccattacatcttcctggtattgagggtctggtc
attcctagtggaacctgtggtcatctgttaaagatgattgatagggatattgctctagtt
agatgggagttcccgcaatctgggattgtcgtgctgcttttgcgtttggcccaagggctg
tacttggagaaaaccagtgaaatcgttatgactcttggatttctcagccggcttgtgact
ttcaacatgggtgtttgctattctcttctgaaccttggtggctatatgcacgatgaaatg
aattcaccaacagaacacctgcgtattaatgtggctgaaatcatttgtgcctggatcaag
aatctgtctcctaattgctctggtgtggcgttgatgtcaatgggagttaacattttagca
aagatgttaaaatgctcaccatatcatgtttcaagattgatagtccaggcaaatatcttt
gatgttgcttttaagacgaatcccttcaaagtagactccaatggcctatcgagtggatcg
tggttgctttctggtcggctcgcgaaaatgcttttgatcgactgtgagcagaatgattgt
caattgacactttcagtgcttgacttcaccatgcagcttatggattctggaatggaaaac
gatgttgtccttgcactagtcattttctccattcagtatgtccttgttaatcatgaattc
tggaattataaaatcaagcacactcggtggaaggtgacactgaaggtgcttgaagtcttg
aagaaatgcattttgtccatttcatatatccagaaacttggtgaagtggtcaaggatatt
ttatttggtgattcttcaatccacaatgcactctttcgacttgtttgcacaacttcagat
ggcctggagaagctctatttcagccggctttatggactgacagatattgaaggattacag
caggctattgtcttgggattggatattctttccagtatgctttccgatttgtcaagggtt
gtgcccactttcaccgtcttttgtcaagcagtcatgtcactgacggcaaaaccagtgcct
gtggttactgctgtgatatcattgatgtcattcttccgaaatcctaagatacaggttggt
gcagcaagactgctctccaggttgtttattattggagacgactcacaatcatatgcactt
agcaatgtatatttcggtctggatgacaagcagatatataattttaaaaataccatttgt
agcattctttgtcaagagaaagtagaaagtgaggatctcataattgctactttcaagatg
cttacttctgctgcacgctatcaggcttcttttcttaccgctgtgatcgctttggaagaa
aattcaatttctgaatcatgcaatggtgacaatcatccagccaacaatgatgcattacag
tgcaatgctgcaaacatattagattgcatatggatttatgttaaaagatctgatgatctt
gtgatgaccaaatcacgtataatgtgtaatgtgctaaacttcctaaaagcattatggcaa
ggagctgctcattatacaaatcttctgaagcagctgagaaattcagacttctgggaaaag
ctactgatttctgccgtgctttccataagtaagaagagttgccaatctgatagcacgacc
gaattggagctccaaaatctggcatacagatatcagtgtcaacataatgtattggatgtg
gtggcctgtgaaatgatcctgcagaaaaagattttacattctgagttggtcacaaaagaa
tcttccaaatgtttacataacgggtcagatggctgtaaagtagcaacagctgaaagttca
tgtaacctgaaggaaatttttggagcgtggtgtgggagctcattggatgcggagactatc
aagacatttgtttcatttgagtatgatgattctgtaaagctgcgtgcaagggttgctgct
ggtctgtttgctgtgcgcatcatgtgtaaagtaaaaggcggtgatagaggaagtttgtct
gtttcactcgttgataaagttactaacctgtgggaaaagttgaggaagttgccagccttt
tctgagttgatggctatttatacgaagcatggttacagtggaggaaatgaactggacgac
ttaattctcaatgatttattctatcatctgcaaggagagcttgaaggtagacatatttcc
cacatgccattcaaggagctgtcacaatatctgctacagtcaaatttcttgcaaacatat
cagcgcaagcaccatgaggacattttccctcaaactgatggtgtctgcttatatgacact
gaccgtctgcaaggggacatggctattgatttgtgggatctttcggattggaaagcatcc
aaagtggttgcagaaatgctgttgctctctttgcagaatgtgaatgtcatggtgtcactc
acaacatccaagctttcagctttaatagctttggcaactactttctccatatctgacaat
gataatgtgagttttgcgtcacttgataatgaggttagaagtggcagaaaaattcctgaa
aaatcattgtcatctagcattgataatatatgccagtctctccaccgcacaatcgagcta
ttacctcctgtttctgatgctagtgaagacatagttgatattcttgcagctcaagcagag
ttgcttttccactttaccaggtctctgagtacacatttatctttatctacatgccttctg
atattaaaaacttcaggttatggcctcaaggtgttgtgtaactgtaggccattggttact
ggtgttttttatccaatgaagatatttttgatgctagttctcttttcactcaaatcaagt
tggagagattctcgtcttggagtacaaacaaaaattgagcataatgaagccttacctgag
gcagctaatgtgagcttggggctactaccgctgatttgcaactgtattgaacttaatgaa
cattgctccctctctgtgattattaccgatcaaataatcaaaggtttttcaacacctgct
acttggttccccataattcaaaaacatctcccaatgcagcgtattgttcttaaacttcaa
gataaaagctcctattcaaacattggcattctattgaagtttcttttgactattgcacat
gtgaaggaaggtgctgagatgcttgtaaaaactggtttctttgcatcgttaagtgtgttg
ttggctgacctatctaatggtagacctctctcagtagttgagagggagagaaatctggca
aacacctttgagaatattgaaagggctcaacctatttggggacttagcttggctgtggtt
acagcaattattaactctttaggagaaagttcgattttcaatgtggaacacgtggtgact
tacttcctcttggagaaggctgatctaatttcatattatctaagtgctccggattttcca
ccagatgatcatgataagaaaagacttcgggcactcaaaccacatacttcattgagtgct
cttagagagattgaaaatacagttatgttaatctgtgttctggcaaagcataggaatacc
tggtcaagggccatgaaagaaatggagtcacagttgagggaaagatgcatacatttattg
gcctttattagctgcggtacaccacgtcatggggaatcaccaggaagagttccccccatc
ttttgtcatcctacccttagggaggagtacgagtggcacaaaaagccatcatctatcagt
agcaaaaatggctggtttgctttttctgcttattgctgcagtctaaatcccaaatattca
tctttttcgtctagaactgctactttgatcaaagatcaaccaaatgagcatgctaacctg
acttcgcagacacacttttcagatgcaatgtctattcagatatacagaattacctctctt
ctccttaagtttttgtgtcaacaagctgaagatgctgctgcaagggctgaagaagtgggt
tttgtcgatcttgctcattttcctgagctaccaatgcctgatatccttcactgcttgcag
gatcaaggaataactattgtcactgaattgtgcgaagccaacaagttgaagcaggttact
tctgaaatacaaggggtctgtattttgctgttgcaaattactgttatggcattgtacctg
gaattttgtgtgatccaaatctgtggaatgagacctgtccatggacatgttgaggacttc
tccaaggaattttatgctctgacaaaagctatggaaggacatacatttttgaaagaatct
atgaactccttgaagcaaatggtgtcttttgtgtatcctgaattattgcaggcagaagat
gtatga
DBGET
integrated database retrieval system
