Solanum verrucosum: 125819476
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Entry
125819476 CDS
T11474
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sver Solanum verrucosum
Pathway
sver03015
mRNA surveillance pathway
sver04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125819476
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125819476
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sver01009
]
125819476
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125819476
03036 Chromosome and associated proteins [BR:
sver03036
]
125819476
Protein phosphatases and associated proteins [BR:
sver01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125819476
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125819476
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125819476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
125819476
NCBI-ProteinID:
XP_049354860
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDVDLIGDVARLDAELLQLPDVSSFAIKDNPFVAQKLFDQWLSLPDTTPLVKNLINNAKA
GGPLNATGTSSSTNVATSSSLPSMFPAGSTPPLSPRSSSGSPRTTRPRAGPSMLGSPLKL
VNEPVKELIPQQFYFQNGRPPPNELKERCLFRINQFFYGHTDGLQMDEFKPITKEICKLP
SFFSTVLFRKIDVDRTGIITRDVFVDYWVNGNMLTKDIATQIYTILKQPDLKHLTQDDFK
PVLRDLLATHPGLEFLRNTPEFQERYAETVIYRIFFYVNRLGDGHLTLRELKRSDLIAAM
QHADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRI
FSQVPRKFTSKVEGKMGYEDFVYFILSEEDKTSEPGLEYWFKCIDLDGNGILTRNEMQFF
YEEQLHRMECMGQEPVLFEDILCQMVDMINPEDQSYFTLHDLKGNKLSSSVFNVLFNLNK
FMAFETRDPFLIRQERENPNLTEWDRFAHREYIRLSMEEDAEDASNGSADVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggatttaattggtgatgtagcgaggcttgatgctgaactgttgcagcttcct
gatgtttcgtcgtttgctatcaaggataatccttttgttgcccagaagctttttgatcaa
tggctatcacttccagacacgacacctttggtgaaaaatttgattaataatgctaaagct
ggtggtcccttgaatgcgactggaacttcttccagcacaaatgtagcaacaagcagttct
ttgccgtctatgtttccggctggaagtacccctcctctttccccaagaagttcatctggt
tcgccacgaacaacgagacccagggcaggcccctctatgttaggatcccctttgaaatta
gtgaacgagcctgttaaagagctaataccacagcagttctattttcaaaatggccgtcca
cctccaaatgaattgaaggaacgctgcttgtttagaataaaccagtttttctatggtcac
acggatggactacaaatggatgaattcaaaccaattactaaggaaatatgcaagttacca
tcgttcttctccacggttctttttaggaagattgatgttgatagaacaggcatcataaca
agggatgtctttgttgattattgggtcaacggaaacatgttgacaaaagatatagcaacc
caaatttacacaatcttgaagcagccagatctcaaacacctgacacaggatgatttcaag
cctgttcttcgagatcttttggcaacacatcctggtttagagttcttacggaacacaccc
gaatttcaagagcgatatgctgaaactgtaatatacagaatatttttctacgtgaataga
ttgggtgatggtcatcttaccctcagggagctgaagcgttctgacctaattgctgcaatg
caacatgcagatgaggaagaagatattaacaaggtccttagatacttttcttatgaacac
ttttacgtgatatattgcaagttttgggagctcgataccgatcatgattttctgattgat
aaagagaacctcattcgatatggcaaccatgcccttacatacaggattgttgatagaata
ttttctcaggttccaaggaagtttacaagtaaagttgaaggaaagatgggttatgaagac
ttcgtttactttatattatcagaggaggataaaacgtcagagcctggtcttgagtactgg
ttcaaatgcatagatttggatggaaatggtattctgactaggaatgaaatgcaattcttt
tatgaggagcagttgcatagaatggaatgcatgggccaagagccagtgctttttgaggat
attttgtgccagatggttgacatgattaatccagaggatcaaagttattttacgttacac
gacttgaagggaaataaactatccagcagtgtttttaatgttctctttaacctcaataag
ttcatggcatttgaaactcgcgacccgttccttatacgtcaagaacgtgagaacccgaat
ttgaccgagtgggatcgctttgcacacagggaatatattagactctcaatggaggaagat
gcagaggatgcctccaacggaagtgcagatgtctgggatgaatcacttgaagcgcctttt
tga
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integrated database retrieval system
