Solanum verrucosum: 125820091
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Entry
125820091 CDS
T11474
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sver Solanum verrucosum
Pathway
sver04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125820091
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125820091
Membrane trafficking [BR:
sver04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125820091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
125820091
NCBI-ProteinID:
XP_049355466
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MLATEGMEDEEKWLAEGIAAIQHNAFYMSRALDSDNLREALKYSALLLSELRTSKLSPHK
YYELYMRAFDELRKLEMFFREEDRHGCSVIDLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGIQHPTRGLFLRSYLAQISRDKLPDLGSEYEGEGDTVMDAVDFV
LQNFTEMNKLWVRMQHNGPVRLKEKLDKERSELRDLVGKNLHVLSQIEGVDLEMYKDVVL
PRVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPAVDVKTVLSRLM
ERLSNYADSSPEVLPDFLQVEAFAKLSSAIGKVIEAQVDMPVVGAISLYVSLLTFTLRVH
PDRLDYVDQILGACVKKLSGKAKLEDSKATKQVVALLSAPXEKYTDIVTVLTLSNYPRVM
DHLDAGTNKIMATIIIESIMKNDTCVSTADKVEVLFELIKGLIKELDGTTTDELDEEDFK
EEQNSVARLIHVLYNDEPEEMLKIICTVRKHIMAGGPKRLTFTVPPLAFSALKLVRRLQG
QDGDMAGEEVPATPKKIFKLLNEIIEALSSVPSPELALRLYLQCAEAANDYELEPIAYEF
FTQAFVLYEEEVADSKAQVTAIHLIIGTLQKMTVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQQANVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITSSAIQSLIELIKTEMQSDTTTPDKASDAFFSSTLRYVQFQKQKGG
LMGEKYGPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaacagaaggcatggaagatgaagagaaatggctagcagaaggaatcgcagct
attcaacacaacgcattttacatgtctcgtgcattggattcggataatctcagagaagcg
ttgaagtattctgctttgttgctgtctgagcttcggacttcaaaactttcgccgcacaaa
tactacgagctttatatgcgagcatttgatgaattgaggaagctggagatgttcttcaga
gaagaagatagacatggttgttcagttattgacttatatgaacttgttcaacatgctgga
aatatattgcctcgattgtatctcctatgtacagtaggatctgtatacataaaatcaaaa
gaggctcctgctaaggacattctcaaggatcttgttgaaatgtgtcgtggtattcagcat
cctacacgtgggctcttcttgaggagttatcttgctcaaattagcagagataaattgccc
gaccttggttctgagtatgaaggagaaggtgatactgtcatggatgcagtagattttgtg
ctgcagaacttcacagagatgaataagctttgggttagaatgcagcataatggacctgtc
aggttgaaagagaagctggataaagaaaggagcgagcttcgcgatcttgttgggaagaat
ttgcacgttcttagtcagatagagggtgttgatcttgaaatgtataaggatgtggttctg
cccagagtattggagcaggttgtcaattgtaaggatgagattgcccaatattatttgatg
gactgcataattcaggtctttccagatgagtaccacttgcagacacttgagactttattg
ggtgcttgtccgcaactccaacccgctgttgacgttaagactgtgctgtcacggttgatg
gagagattgtcgaactatgctgattcaagtcccgaagtgttacctgactttcttcaagtt
gaagcatttgccaagctaagcagtgccatcgggaaggtcattgaagcacaagttgatatg
ccagttgttggagccatttctttgtatgtatctcttctgaccttcactctccgtgttcat
cctgatcgactagactacgtggatcaaatactgggagcatgtgtaaagaaactttctggt
aaagccaagcttgaggatagtaaagcgacaaaacaagttgtcgctctcctgagtgcacct
ntggagaaatacactgacattgtgacagttctaactctttcaaattatccacgagtcatg
gatcaccttgatgctggaacaaacaagatcatggcaacaataatcattgagagcatcatg
aagaatgacacctgtgtatcaactgctgacaaggtcgaggttttgtttgaattgataaaa
gggcttatcaaggaattggatggaactactacggatgagcttgatgaggaggatttcaag
gaggaacagaattctgttgctcgccttatacacgtgctgtacaacgatgagcctgaggaa
atgttaaagataatatgcactgttaggaagcatataatggctggaggtccaaagcgccta
acttttacagttcctcctctagccttttctgcactgaagttggttaggagattgcaaggt
caggatggagatatggcgggagaagaggttccagctacaccaaagaaaatttttaagtta
ttgaatgagattatcgaggctctttcatcagttccatcgccagaattggcattgcggttg
tacttgcagtgtgcagaggctgccaatgattatgaacttgaaccgattgcatatgaattt
tttacacaagcttttgtactatatgaagaagaagttgcggattctaaagcgcaagtgact
gcaatacacttgataatcggaactcttcaaaagatgactgtgtttggtgttgagaacagg
gataccttaactcataaggccacagggtattcagcaaaactcctaaagaaacctgatcaa
tgtagagcagtttacgcttgttcacatctattttgggttgacgatcaagatggtattaaa
gatggagaaagggtcttgctttgcctaaagcgttcgttgcggattgctaatgcagcacaa
caacaagcaaatgttacaaggggtagcagtggaccggtcacgctttttgttgaaatactt
aacaagtacctttacttttttgagaaggggaaccctcaaataacatcttctgcaattcag
agccttatagagttgattaaaactgagatgcagagtgacaccacaaccccagataaagcg
tcagacgctttcttctccagcacattgcgttatgttcaatttcagaaacaaaaaggaggg
ctaatgggtgagaaatacggtccaattaaggtgtga
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