Solanum verrucosum: 125820973
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Entry
125820973 CDS
T11474
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sver
Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sver03021
]
125820973
Transcription machinery [BR:
sver03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
125820973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MID_MedPIWI
Med13_N
Med13_C
Motif
Other DBs
NCBI-GeneID:
125820973
NCBI-ProteinID:
XP_049356353
LinkDB
All DBs
Position
Unknown
AA seq
1989 aa
AA seq
DB search
MWTNVFKIGGLHQISWFQFLPHESDVNSLVDKRVKLDKKDAATWLVLSSHLQLQKEGFLS
TWTNSFVGPWDPSQGLYNPDEKIKLWLFFPGQHSAVVEKAQSAISKLRVLASGLWVAPGD
SEEVAAALSQALRNCMERTLRGLSYVRYGDVFTKYRPFSQNEELFRKGQPVVEFVFAATE
EAIFVHVIISAKHIRALSSGDIDKISENTSNVSGEGLPVIVSPHGMRGRLTGCCPADLVK
QVYLSSGKFSASNGIVGLPCNVSQSSYQLKGQNCYVEVNLGSTAPGNNNIQESLNVQNNS
SRPTITEASAMGNVVQSKIPDNCGRVLIYPPEAVLVPVVQTACARSSLKRFWLQNWIGPS
LSFTSSFMHCFDFHCDAKVNSVDGSWLDANVIRSNRRYNSSSNSNSSSVSSISTSSSDSD
YKTSGTGDLEADADSLMCRQSGLSSLDRSQNDNLKTGLKRSRAGISESFSQGGAVINQST
SDYASMDVNNSAITEGNDQIGLQWGWDDGDRDAGMDIQALLSEFGDFGDFFENDALPFGE
PPGTAEAQAQALMFPAADSVDVSSSPCPSMMDVQDQILLPVGFSSFDSFNQPPPPAILDD
SLSKHQEVIKSAAVANQVNSASASIAGEFNHLIKAEALMSFAPEYGAVETPTGESSHSIF
RNPYVPKSREVETANSSSNSYVYSATPPLSPCFDACEEKSGVTVNLKTGTGRHDTSSIVQ
SKKYYTHIGSGKEKNDDKVSGYVRSCATRETQVAQSPFSGFNSTNSVKYIHNKTDKASEG
LLKAGSSGQSIKTVLATEVECLMCQAFMCKIRHTLLSSSGCLPVGMSRMSGSTNRNQSQG
EAVVTVDNMSSKSEMKKEIIPVRIAGDIDGGLLDGTLNAPVGVWRTVGVSKGMKQPTAGL
ESCHSVQHNSFIEDSMLAYGLRQPLQELLDGMALLVQQATSFVDVALDADSNDGSYGWLA
LQEQWRRGFSCRPSMVHAGCGGVLASCHSLDIAGVELIDPLSADVQASFTLTLLQNDIKA
ALKSAFSTMEGPLSVVDWCKGRSQSNDGGISGDGFSAESTASASECRDSSSTISLSVGEP
ISPSQSSAGGSSSLRDGIRADEASERRLSQDTCLSDSEQLPGSRLRPTLAAVPYPAILVG
YQDDWLKTSPSSLQFWEKAPFEPYAMPKHMTYHVVCPDINALTTAATDFFQQLGTVYETC
KLGTHSPQCVGNEMEIDSGKNASSGFVLIDCPQSMKIDSSSASMLGSISDYFLSLSNGWD
LESYLKSLSKVLRNLKLSSCMTMNPKEGSTGPCTVVYVVCPFPEPLAVLQTVIESSIAVG
SVVLSSDKERRSTLHNQVGKALSYSAAVDEAFSNVLTLSGFCIPKLVLQIVTVDAIFRVT
SPALSELVILKEIAFTVYNKARRISRGTPSDMVQSSSMPGRSHPVLMQMNSQVPGMWKDC
VGPRGIGTSLQREADLDASLRPGSWDNWQASRGGGLGCEPNRIGDFSFQDEIRYLFEPLY
ILAEPGSLDRGLSFPMSGNLMTESSKLLLDDGTSGSFMQSSASSGGGDTGLNTQSETSVP
DGFGSAHQKSLPSLHCCYGWTEDWRWMVCIWTDSRGELLDNHIYPFGGISSRQDTKGLQS
LFVQILQQGCQILQSCPPEAAIAKPRDFVIARIGCFLELECQEWQKALYSIGGSEVKKWS
LQLRRSVPDGMTASSNGTSLQQQEIGLIQERALPSSPSPLYSSHSKASSFMKGGLGQPST
RKQLIGGQGVVDNSRGLLQLVQSISFVSLSIDHSLQLMIQADSTSHGTSQSSGIMSQPGY
LEGYTPVKSLGSTSTSYILIPSPSMRFLPPVSLQLPTCLTAESPPLAHLLHSKGCAIPLS
TGFVVSKAVPTMRRDVRSISKEEWPSVLSVSLVDYYGGSNIIQEKFLKGVGKVGGRGTGS
ETRDVEIATHLILENIAAELHALSWLTVSPAYLERRSALPFHCDMVLRLRRLLHFADKEV
SRQPVKSQV
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaatgtgttcaagatcggtggcttacatcaaatatcttggtttcagtttctt
cctcatgaatctgatgttaactctctggtggacaagagggtgaagctggataagaaagat
gctgccacatggctcgtgctctcatcgcatctacaattgcagaaggaaggatttctcagc
acatggaccaattcttttgttggaccttgggacccatctcagggtctttacaaccctgat
gagaagatcaagctctggctttttttccctgggcaacattcagctgtggttgaaaaggca
cagtcagctatatccaaattaagagttctggcatcaggtctctgggtagctcctggagat
tcagaagaggttgctgctgcgctatctcaggccttaaggaattgcatggaaagaacgctc
aggggactttcatatgttagatatggagatgtatttacaaaataccgtccattttcacag
aatgaagagttgttcaggaaggggcaaccagtggttgagttcgtatttgctgctactgaa
gaggctatctttgtccacgttattatatctgcaaagcatatacgagcactttcaagtggt
gacattgataaaatatcagagaatacatctaatgtctctggcgaggggcttccagttatt
gtctcacctcatggaatgcgtgggaggcttactggatgttgcccagctgatcttgtgaag
caagtgtatctcagttctggcaagtttagtgcttcaaacggtattgttgggctaccatgc
aatgtatctcaatctagttatcagcttaagggacagaattgctatgttgaagttaacctt
ggttccactgcaccgggaaacaacaatatacaagaaagtttaaatgtacagaataattca
tcaaggcctaccataacagaagcctctgcaatgggcaatgttgttcagagtaaaatacca
gataactgtggaagagtgcttatttacccgcccgaggctgttcttgtcccagtggtgcaa
acagcatgtgctagatcatctcttaaaagattctggctacagaactggattgggccctca
ttgtcctttacatcctcctttatgcattgttttgattttcattgcgatgccaaagtcaat
tcggtggatggttcttggcttgatgcaaatgtcatacgctctaatcggcgttataacagt
agcagtaacagcaatagtagtagtgttagcagcataagtacctcttctagtgatagtgat
tacaagacttcaggaactggggatcttgaagcagacgctgattctttgatgtgtagacag
tctggattatcttctttggatcgatcccaaaatgacaatcttaagacgggcttaaagagg
tcgcgagctgggatttctgagtcatttagtcagggaggagcagtgattaatcaatcaaca
agtgattacgcctcaatggatgttaataattctgcaattactgaaggaaatgatcagatt
gggcttcagtggggttgggatgatggtgatagagatgcagggatggatattcaggcactt
ctctcagagtttggagattttggtgacttctttgagaatgatgctttgccatttggagag
cctccaggaactgcagaggctcaggctcaggctcttatgtttcctgcagcagatagtgtg
gatgttagtagcagcccatgtccttcgatgatggatgtgcaagatcagattcttttgcca
gtaggtttttcatcctttgatagctttaatcaaccaccacctccagcaattctggatgat
tcactgagcaaacatcaggaagttataaaaagtgctgcagttgctaatcaagtaaacagt
gcttcagcatctattgctggtgaattcaatcacttaattaaagctgaagctctcatgtca
ttcgctccagagtatggagcagttgaaacccctacaggggagagctcccattcgattttc
aggaatccctatgttccgaagtctcgggaagtggagactgcgaattcaagctcaaatagc
tatgtctactcagcaaccccacctctgtcgccttgctttgatgcatgtgaggagaagtcc
ggtgtgactgtaaacctcaaaacaggtaccggaaggcatgatacaagctccattgttcaa
tcaaagaaatattacactcatattggaagtggaaaagagaaaaacgacgataaggtatct
ggttatgtacgtagttgtgctacacgtgagactcaagtagcacagtctccgttttctggt
ttcaattcgacaaattctgttaaatatatccacaataaaaccgataaagccagtgaaggg
ctactaaaagcaggcagctctggtcaatcaataaaaactgtgctagcaacagaagttgaa
tgccttatgtgccaggcatttatgtgtaagatacggcatacactattatcttcaagtggc
tgccttcctgtaggcatgagcaggatgtcagggagtaccaatagaaaccagtcacaaggt
gaagcagtggtcactgtggacaatatgtcaagcaaatctgagatgaagaaagaaataata
ccagttaggatagctggcgatattgatggaggattactggatgggacccttaatgcacca
gttggtgtgtggcgcactgttggagtttctaagggaatgaagcaaccaacagctggttta
gaatcttgccactctgttcagcataattctttcattgaggatagtatgctagcttatggg
ctaaggcaaccccttcaggaactcctagatgggatggctttacttgtgcagcaagctaca
tcttttgttgatgttgcactagatgctgatagcaatgatggttcttatggttggctcgca
ctgcaggagcagtggaggcgtggcttttcatgtcgaccatccatggttcatgcaggttgt
gggggagtgttggcttcctgtcattcgctggatattgctggtgtggagcttattgatcca
ctttcagccgatgttcaggcatcattcaccctcactctgctgcagaatgatattaaagca
gctctgaaatctgctttcagtactatggaaggtcctttatctgttgttgattggtgcaaa
ggtcgcagtcaatcaaatgatgggggaatatctggtgacggtttttctgcagagtccact
gcaagtgcaagtgaatgtcgagattcttcgagtaccatatcattgtctgtgggagaacct
ataagtccatctcagtcctctgctggtggatcatctagtttgagagatggaattagggcg
gatgaggcaagtgagcgaagattaagccaagacacttgtctatcagattcggagcagcta
ccaggctcaaggcttaggccaacattggctgcagttccatatcctgctatacttgttgga
tatcaagatgattggcttaagacatcacctagttctcttcagttctgggaaaaggcacct
tttgagccttatgcgatgcccaagcatatgacatatcacgttgtctgcccagacatcaat
gctctaacaacagctgcaactgattttttccaacagcttggaactgtttatgagacatgc
aaactgggaactcattcgcctcaatgtgtgggaaatgaaatggagatagattccggcaag
aatgcatcttctggttttgttctgattgattgcccccagtcaatgaagatagacagcagt
agtgcatctatgctgggatcaatcagtgattactttctgtccctttccaatggatgggat
ttagaaagctatttgaagtctctctcaaaagttctcagaaatttaaagcttagttcatgc
atgaccatgaatccaaaagaaggaagtactggtccatgtacggtggtatacgtggtttgc
cctttccctgagcctcttgcggttctacagacggtgattgaatcttctattgctgttgga
tcagtggttctttcttcagataaagagaggcgatctacgctgcacaatcaagttgggaag
gccttaagttactcagcagcagtggatgaggccttctcaaatgttttaacactttctggg
ttttgtatccctaagctggtattgcagattgtcactgttgatgcaatttttagggttaca
agccctgctctgagtgagcttgtcatactgaaggaaattgctttcacagtttataacaaa
gcccgcagaatatctcgagggacccccagtgacatggttcagtcgtcatccatgcccggc
agatctcatccagtcttaatgcaaatgaattcccaagttccagggatgtggaaggactgt
gttggtcctcgaggcataggaacttcccttcagagagaggctgaccttgatgcaagccta
aggcctggtagttgggacaactggcaagcatcaagagggggaggtctcggatgtgagcca
aacagaatcggggatttttcttttcaagatgaaattcgttatttgtttgagcccctttac
attcttgctgaaccaggttcattggatcgtggactttcatttccaatgtcgggtaatcta
atgactgaatcttcaaagcttttgttggatgatggtacaagtggaagttttatgcagagt
tcagcttcttcaggtggtggagacactggactgaacactcagtctgaaacatctgtacca
gatggttttggatctgcacatcaaaaatcacttccaagcctgcattgttgttatggttgg
actgaggattggcgctggatggtgtgtatatggacagattccaggggagaattgcttgat
aatcatatatatccatttggggggataagtagtaggcaggatacaaaaggtctgcaatct
ttgtttgtgcaaattttgcaacaaggatgtcagatacttcagtcatgtccacccgaggct
gccattgccaagcctagggattttgtcattgctcgtattggatgcttccttgagcttgag
tgccaggaatggcagaaagccttgtattcaattgggggatctgaggtaaagaaatggtcc
ctgcagctaaggcgatctgtgcctgatggaatgactgcaagtagtaatgggacgtccttg
cagcaacaggaaataggtctgattcaagaaagagcacttccttcctcccctagtccattg
tacagttctcactcaaaggcttcctctttcatgaaaggtggcttaggtcaaccatccacg
aggaagcagttaattggtggacagggtgtagtggacaactccaggggcttacttcaattg
gtgcaaagcattagttttgtctctctttctattgaccattccttacagcttatgattcaa
gcggactcaacaagtcatgggacaagtcaaagtagtggcattatgagtcagccaggttat
cttgagggttatactcctgttaagtcccttggttctacgtccacctcctacattctaatt
ccgtcacccagtatgagattcctacctcctgtcagtcttcagcttcccacttgcctgact
gctgaatcaccaccactcgcccatcttctccacagcaagggatgtgccattcccctttca
acaggttttgtggtttcaaaagcagtacctacaatgaggagagatgtaaggagtatctca
aaagaagaatggccctcagttctttctgtcagccttgttgattactatggtggcagcaac
atcatccaagaaaagtttttgaagggggttggtaaggttgggggaaggggtacaggctcg
gaaacaagagacgttgaaatagcgactcacttgattcttgagaacattgctgcagagctc
catgctttatcatggttgactgtaagtccggcatacttggagagaagatctgctttgcct
tttcattgtgacatggtattaaggcttcgaagactgcttcactttgccgataaggaagtt
tctcggcaacctgtgaaaagccaagtttag
DBGET
integrated database retrieval system
