Solanum verrucosum: 125821127
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Entry
125821127 CDS
T11474
Name
(RefSeq) peroxisome biogenesis protein 5
KO
K13342
peroxin-5
Organism
sver
Solanum verrucosum
Pathway
sver04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125821127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125821127
Membrane trafficking [BR:
sver04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125821127
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_14
TPR_19
CFAP70_TPR_C
TPR_7
TPR_12
TPR_9
RMD1-3
PPTA
TPR_20
CFAP70_mid_TPR
CABIN1_N
NGF
Motif
Other DBs
NCBI-GeneID:
125821127
NCBI-ProteinID:
XP_049356491
LinkDB
All DBs
Position
Unknown
AA seq
744 aa
AA seq
DB search
MAMRDLVTGAPSCGEPSSSSNPLGALANALIGSSSKTQERLKEIPTSVTTSSNGNFLAGV
EEPFVSLPGSEFEHPLQPNIQGSQFLQGFRSADQNRLADAWDEIQRPQLPFAHGSQNMTN
IPLEHARLQPDLNGPPQQVLSSFLHSFVNSGHGGVPFRPASLPLLGLSEGDKQCIRDRST
IMARHFFADKTEDFINGQVNALLSSLEIDNHVRARGPVPGRYPELEEYWNESLAMKPVPH
VADGWINEFAQNRVGHADPNAWAQSFEQQHGSNGWASEFEHEQSQLGMIGQMRGANIPNL
AAMEQTRMLAHTLAQNSDPKFQNSKFLQFVSKMSRGEISIEENQFKPATISSGDWAAEYE
QQHNGGQSWADQFAHEELSRGPQGWVNEFSAERAQHGSVNDEWVSEFSKLNVNDDWADEF
GRQVAEGAFGETSADGWAEAYDEYMNEQAALKQQSDASRGVYVFSDLNPYVGHPNPLKEG
QELFRKGLLSEAVLALEAEVLKNPENAEGWRLLGIAHAENDDDQQAIAAMMRAQEADPAN
LEVLLSLGVSHTNELEQQAALKYLYSWLRHHPKYGSIAPQEQPISFYHADVAGLFTDAAK
MAPEDADVHIVLGVLYNLSREYDKAIESFKTALELKPRDYSLWNKLGATQANSVQSSDAI
LAYQQALDIKPNYVRAWANMGISYANQGMYEDSIRYYVRALAMNPKADNAWQYLRISLSC
ASRNDMLEACDSRNIDVLQKEFPL
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgagagacttggtcaccggtgctcctagttgtggcgaaccctcttcttcttct
aatccacttggtgctctcgctaacgcactcatcggttcatcatctaagactcaggagagg
ctaaaagagatccctacatcagtaactacatcgtccaatggcaacttccttgcgggtgtt
gaagagccatttgtttcacttccaggatcagagtttgaacatccacttcagcctaatatt
cagggttcccaattccttcaagggtttcgttctgctgatcaaaataggctcgctgatgct
tgggatgagatacaaaggcctcaacttccttttgctcatggaagtcagaacatgacaaac
atccctttggagcatgctcggcttcaaccagatttgaatgggcctccacaacaagtattg
tcaagctttctgcactcgtttgtcaacagcggtcatggtggcgttccgtttcgtcctgct
tcactgccattattaggtttatcagaaggtgacaagcaatgcatacgggaccgtagcacg
atcatggcccgacatttttttgccgataaaactgaagacttcataaatggacaggttaat
gctctattgtcttcattagaaattgataatcatgttagggcaaggggccctgtgcctgga
agatatcccgagcttgaggagtattggaatgagtcattagctatgaaacctgtgcctcat
gttgcagatggatggattaatgagtttgcacagaaccgagtaggacatgctgaccccaat
gcttgggcccaatcatttgaacaacaacatggttctaatggctgggcatctgaatttgag
catgagcaatcccaacttggaatgattggtcaaatgagaggtgcaaatattcctaatcta
gcagcaatggaacaaacacgtatgttggcccatacattagctcaaaacagtgacccaaaa
tttcagaattccaaatttctccaatttgtatccaagatgagtcgtggtgaaatttctatt
gaagaaaatcaattcaagcctgctacaatttcttctggggattgggcagcagaatatgaa
cagcagcataatggaggtcaatcatgggctgaccagtttgcacatgaggagctttctcgt
ggaccacaagggtgggtgaatgagttttctgctgaacgtgcgcagcatggatctgtaaat
gatgagtgggtaagtgaattttcaaagttgaatgtgaatgatgattgggcagatgaattt
gggcgtcaagttgctgagggagcatttggtgaaacctctgctgatggttgggcagaggct
tatgatgagtatatgaatgagcaagctgctctcaagcagcaatcagacgcatcaagggga
gtttatgtgttctctgatctgaacccttatgttggtcatcctaatcctttaaaagaaggg
caagaattgtttcgtaagggtctcttaagtgaagcagttcttgctttggaggctgaagtc
ttgaagaaccctgaaaatgctgagggttggaggttacttggcatagcacatgctgaaaac
gatgatgatcaacaggctatagctgcaatgatgcgggcacaggaggctgatcctgcaaat
ctggaagttcttctttcccttggagtaagtcatacaaatgaactggagcaacaagctgca
ttgaagtatttgtatagttggttacgccaccacccgaagtatgggagtattgcgcctcag
gagcagcccatttctttctatcatgctgatgtagctggattgtttacagatgcagctaaa
atggcacctgaggatgctgacgtacacattgtacttggggtgttatacaatctatcaaga
gaatatgacaaagctatagagtcttttaagacagcactagagctcaaacctagggactac
tcactctggaataagcttggtgcaacacaagctaacagtgtgcagagttctgatgcaata
ttggcttatcagcaggcgctagatataaagcctaactatgtacgtgcatgggcaaacatg
ggcatcagttatgccaaccagggtatgtatgaggattccatccgttattatgtccgggca
ctagcaatgaatcccaaagcagataatgcctggcaatatttgagaatatctctgagctgt
gcatctcgaaatgatatgttggaagcttgtgactcgcggaatattgatgttctccagaag
gaattccctctgtga
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