Solanum verrucosum: 125821211
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Entry
125821211 CDS
T11474
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125821211
Spliceosome [BR:
sver03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
125821211
Other components
Complex C specific factors
125821211
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Mis12
Motif
Other DBs
NCBI-GeneID:
125821211
NCBI-ProteinID:
XP_049356588
LinkDB
All DBs
Position
Unknown
AA seq
866 aa
AA seq
DB search
MDDYQEMERFGMENDFEDGQWIGGEFYYRKRKEKKQVQTKDDTLYGIFASGDSDSDYEGS
SSKKRKKGFSSKPDLTKPVNFVSTGIVMPNKEIDQNSKEENEEQLMPEEENKGLGLGFGA
ASVGGLGFGTSSSSNNNNNADEVEADGGNFLPTAFGRKIKEGALRREKEREKEKSMLAKK
SSPSESGRREPSGDVGGFEKFTKGIGLKLLEKMGYKGGGLGKNEQGIVAPIEAKLRPKNM
GMGFNDYKETSSAPALQESDGKQTVARPAILPVEGRSKEKLWSKQAKKVKKVYVTAEELL
AKKQEQGLETVQKVFDMRGPQVRVLTNLENLNAEEKARENDVPMPELQHNIRLIVDLAEL
DIQKIDSDLRNEMETVVALQKEKEKLQAEAARQKRQFDNMEEIVGVLDRIGEESTSGTLT
LDSLAKAFADLQQQYVEEYTLCNLSSIACSYALPLFIRIFQGWDPLQTPTHGLEVVSLWK
DLLQGNDIFAISDAASPYTQLFMEVVFPAVRISGTNTWQARDPEPMLRFLDSWEKLLPSS
VLQSILENIILPKLSAAVNSWDPRRETVPIHSWVHPWLPLLGQRLESCYHTIRSRLESVL
HAWHPSDMSAYYILSPWKTVFDAINWEKLMVRFIVPKLLAVMHEFQINPANQNLDQFYWV
RTWATAIPIHHMLPILDIFFNKWQEVLYHWLCSNPNFEEVTKWYLGWKELIPPELQANEH
IRYRLNLALDMMNQAVEGLEVVQPGLRENISYLRVLEQRQFETQKKAAVQAQSRPSVGSN
SGIQMDGAVDMSMKEVIEVHAQENGLLFKPKPGRMQDGHQIYGFGNISIIIDSLNQKVFA
QVEDRWSFVSLEQLLDLHNRSGLKRR
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgattatcaggagatggagaggtttggtatggagaacgattttgaagatggacag
tggatcggtggtgaattctactatcggaaacggaaagagaaaaagcaagttcaaaccaaa
gatgatacgctctatggtatttttgcttctggcgatagtgattctgactacgaaggatca
tcctctaagaagcgaaaaaaaggtttttcatcgaaacctgacctaaccaaacctgttaat
tttgtatcaactggaattgttatgcctaacaaagaaattgatcagaattccaaagaggag
aatgaggagcagctaatgccagaagaagagaataaaggtttaggattgggatttggggca
gcatctgttggcggccttggatttggtactagtagtagttcgaataataataataatgct
gatgaggttgaagctgatgggggaaactttctgcccactgcttttggtaggaagatcaaa
gaaggtgcactaagacgtgagaaggaaagggaaaaggagaaatctatgttggcgaagaaa
tcttcgccgtctgaatcagggagaagggaacctagtggtgatgttggtggctttgagaag
tttaccaaagggatagggttgaagttgcttgagaagatgggttataagggaggtgggttg
ggtaaaaatgagcaaggaattgtggctccgattgaggcgaagctgaggcctaagaatatg
ggaatgggatttaatgactacaaggagactagtagtgcaccagctcttcaagaatcagat
ggaaagcagactgttgctcgtcctgcgatactacctgtggaaggtcgatcaaaagagaag
ctttggtcaaagcaagctaaaaaagtgaagaaggtttatgttacagctgaagagttgtta
gctaaaaagcaggagcagggcctggaaactgttcagaaggtgtttgatatgagaggtcca
caagttcgagtcttgacgaatctggagaacttgaacgccgaagaaaaagcaagggagaat
gatgttccaatgcccgaacttcagcataatatcaggttgattgtggacttggcagaactt
gacatacaaaagattgatagtgatttgagaaatgagatggagacagttgttgctttgcaa
aaggagaaggagaagcttcaagctgaggcagctcgtcaaaaaaggcagtttgataatatg
gaagagattgtaggtgtattggaccggataggggaagagagcacatctggtaccctgacc
ctagactcccttgcaaaagcatttgcagacttacagcagcagtatgttgaggaatacaca
ctctgcaacttgtcaagcatagcgtgctcatacgctctgccattgttcattcgaattttt
cagggatgggatccacttcaaactccaacacatggattggaggtggtttcactgtggaag
gatcttttgcaaggtaatgacatttttgctatctctgatgctgcatctccttatactcaa
ctatttatggaagttgtgttccctgctgttagaatatctggcaccaatacctggcaggct
agggaccctgaaccaatgcttcgttttttggattcttgggagaagctattgccttcttca
gttcttcagtcaatattggaaaacattattttgcccaagttatcagctgctgtgaactcc
tgggatccacgtcgagaaacagttccaatacattcctgggttcatccatggttgccctta
ttgggtcaaagattggaaagttgctaccacactatacgtagcagattggaaagcgtactg
catgcttggcacccaagtgatatgtctgcatactacatactgtctccttggaagactgtt
tttgatgcaattaactgggaaaaactaatggtccgatttattgttccaaagttgttagca
gtgatgcatgaattccaaataaatccagcaaatcagaaccttgatcagttctattgggtc
cgtacttgggctactgctattcccatccatcacatgcttccaatactggatatattcttc
aacaagtggcaagaagttttgtaccactggttatgctcaaacccgaactttgaagaagtc
acaaaatggtatttgggttggaaggaacttattccacctgaacttcaggcaaatgaacac
attcgctatcgactaaatcttgctctagacatgatgaaccaggctgttgaaggcttggag
gtcgttcagcctggtttgagggagaacattagttatcttagggttcttgaacaaaggcaa
tttgagactcagaaaaaagcagcagtacaagctcaatcccgcccttctgtgggctcgaac
agtggtatccaaatggatggtgcggttgacatgagcatgaaagaagttattgaagttcat
gctcaagagaatggcttgctgttcaagcctaagcctggcaggatgcaagatggtcatcag
atatatggttttggtaacatcagtattattatagattctctcaatcagaaggtatttgcg
caagttgaggacaggtggtcttttgtgtcacttgagcagctgttggacctgcataatcga
tctgggttaaagcgtcgatag
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