KEGG   Solanum verrucosum: 125821335
Entry
125821335         CDS       T11474                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K08770  ubiquitin B/C
Organism
sver  Solanum verrucosum
Pathway
sver04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125821335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sver04121]
    125821335
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sver04147]
    125821335
Ubiquitin system [BR:sver04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   125821335
Exosome [BR:sver04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   125821335
  Exosomal proteins of other body fluids (saliva and urine)
   125821335
  Exosomal proteins of colorectal cancer cells
   125821335
  Exosomal proteins of bladder cancer cells
   125821335
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 TBK1_ULD DUF2604
Other DBs
NCBI-GeneID: 125821335
NCBI-ProteinID: XP_049356708
LinkDB
Position
Unknown
AA seq 685 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGF
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgcagatctttgtcaaaaccctcactggaaagactatcacccttgaggtggaaagctca
gacaccattgacaacgttaaagccaagatccaggacaaggaaggcattcccccggaccag
cagaggctgatctttgcaggcaagcagcttgaagacggccgtactctagccgattacaat
attcagaaggagtcaactctccacttggtgctccgtcttcgtggtgggatgcagatcttt
gtcaaaaccctcactggaaagacgatcaccctcgaggttgaaagctccgacaccattgac
aatgttaaggctaagatccaggacaaggaaggcattcccccagaccagcaaaggctgatc
tttgctggcaagcagcttgaggacggccggacccttgctgattacaacatccagaaggaa
tcaacccttcacttggtgctccgtcttcgtggtggaatgcaaattttcgtgaagactttg
accggaaagaccatcacccttgaggttgaaagctccgacactattgacaacgttaaagcc
aagatccaggacaaggaaggcattcccccagaccagcaaagattgatctttgccggaaag
cagcttgaggacggccggacccttgctgattacaacatccagaaggagtcaacccttcac
ttggtccttcgtcttcgcggtgggatgcaaatctttgtgaagaccttgactggcaagact
attacacttgaggtggaaagttctgacaccattgacaatgttaaggccaaaattcaggac
aaagaaggtattccaccagaccagcagaggttgatctttgccggaaagcagcttgaggat
ggccggacccttgctgattacaacatccagaaggagtcaacccttcacttggtcctgcgt
ctccgtggtgggatgcaaatcttcgtgaagaccttgactggcaagactattacccttgag
gtggaaagttcagacaccattgacaacgttaaggctaagatccaggacaaggagggcatc
cctccagaccagcagagactgatctttgccggaaaacagcttgaagatggccgtactctc
gctgattacaatatccagaaggagtccactcttcacttggtgctccgtcttcgcggtggg
atgcagatatttgttaaaaccctcactggaaagacaattacccttgaggttgaaagctcc
gacaccattgacaacgttaaagccaagattcaggacaaggaaggcattcccccagaccag
caaaggttgatctttgctggaaagcagcttgaggatggccggacccttgctgattacaat
atccagaaggagtcaactcttcacttggtcctccgtctccgtggtggaatgcagatcttt
gtcaaaaccttgactggcaagactattacacttgaggttgagagctccgacaccatcgac
aatgttaaggccaagattcaggacaaagagggtatcccaccagaccagcagaggttgatc
tttgccggaaagcagcttgaggacggtcgtacccttgctgattacaacatccagaaggaa
tccacccttcacttggtcctccgtcttcgcggtgggatgcaaatctttgtcaaaaccttg
actggcaagactattaccctggaggtggaaagctctgacaccatcgacaatgttaaggcc
aagattcaggacaaagagggcatccctccagaccagcaaaggttgatttttgctggcaag
cagttggaagatggaaggacactggccgattacaatattcagaaggaatcgacccttcat
cttgtgttgaggctcaggggaggtatgcagatttttgtgaagaccttgactgggaaaacc
atcactttggaggtggagagttctgatactattgacaacgtgaaggccaagattcaggac
aaggagggaatcccaccagaccagcagaggctgatctttgcagggaaacagctcgaagat
ggtaggactttggctgactacaacatccaaaaggagtctactctgcaccttgtcctccgt
ctccgtggtggtttttag

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