Solanum verrucosum: 125821412
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Entry
125821412 CDS
T11474
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sver Solanum verrucosum
Pathway
sver03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125821412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125821412
Enzymes [BR:
sver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125821412
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125821412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
125821412
NCBI-ProteinID:
XP_049356788
LinkDB
All DBs
Position
Unknown
AA seq
697 aa
AA seq
DB search
MSNTAYGISEPISTGGPSELDVVRNRELEKFLADAGLYESHEEAIKREEVLGRLDQIVKT
WVKNVCRAKGFNDDLVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAMREDFFGELH
RMLEEMPEIQELHPVPDAHVPVMKFKFNGVSIDLLYANVSLWVIPEDLDVSQESILQNVD
DQTVRSLNGCRVTDQVLHLVPNIQSFRTALRCMRLWAKRRGVYSNVTGFLGGINWALLVA
RICQLYPNAAPSMLVSRFFRVYSLWRWPNPVLLCPINEGSLGLAYWDPRRNFKDRQHLMP
IITPAYPCMNSSYNVSTSTLRVMMEEFLRGNEICEAIEANKASWGSLFEPFPFFEAYKNY
LRIDIATESDDDMRQWKGWVESRIRLLTLKIERDTVGVLQCHPHPGEFSDKSKLFHHSYF
MGLRRKQGVNPQQGEQFDIRSTVEDFKRDVYAYSFWKSSMWIHVCHVRRKDLPDFVFSGG
VRPAQPAKSESRSGSRSLGSAKTTSPDAASSRKRKHDEVNTGFSPKDSDASSPGETRELK
HFEADIGDTSSTTLVDNQVEVSIKSTLPVPASGAAVTETITVVQSAELTVSQQSGPHGVE
DLGYDLELTNGVKHFDGADELQTEPPTPEQIVGAATSEEKDRIGGSSNNVLQSEGLEELE
PIEPAPSSSIASAAFVVPQKPLIRFNFTSLRKTTEST
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacactgcatatggaatatctgagccaatttcaactggtggaccctctgaattg
gatgttgttagaaaccgcgaactggaaaagtttcttgcagatgcaggcttatatgaaagt
catgaagaggccattaaaagggaggaagtgctagggagattagaccagattgtgaagacg
tgggtgaaaaatgtctgtcgtgctaaaggcttcaatgatgacctggtgcatgaggcaaat
gcaaaaatcttcacatttggttcatatcggcttggtgtacatggccctggtgctgatata
gacacactatgtgtaggacctagacatgcgatgcgtgaggacttctttggtgaacttcat
agaatgcttgaagagatgcctgaaatacaagaacttcatcctgttcctgacgctcatgtt
cctgttatgaagttcaagttcaatggggtttctatagaccttctttatgcgaatgtatca
ctctgggttattcctgaggacttggatgtttctcaggagtctatactacagaatgtggat
gatcagactgttcgtagtcttaatggatgcagagtaacagatcaagttttgcatttagta
ccgaatattcagagtttccgcaccgcactgagatgcatgagattgtgggcaaaacggcgt
ggagtttactcaaatgttaccggatttctaggcggtataaattgggcactgcttgttgct
aggatttgccagctttatcctaatgcagctcctagcatgttggtctctcggtttttcaga
gtctacagtttgtggcgctggccaaacccagttttgctgtgtccaataaatgaaggatct
ctagggctggcctattgggatcctcggaggaatttcaaagataggcagcatctaatgccg
ataataactccagcatacccctgcatgaattcgagttacaatgtttcaacgagtaccttg
cgtgtcatgatggaagaattccttagagggaatgaaatttgtgaggcaatagaagctaac
aaagctagctggggaagtctatttgagcctttccctttctttgaagcctataaaaactac
ttgcgaatagacatagctacagaaagtgacgatgacatgaggcaatggaaaggatgggtt
gaatctaggatacgcctgcttactctaaagattgagagagacacagtcggtgtacttcag
tgccatccacatccgggtgaattctcagataaatctaagctatttcaccattcttatttt
atgggattgcgcagaaaacaaggtgttaatcctcaacaaggcgaacagtttgatataagg
tcgacagttgaggattttaagcgagatgtatatgcatattctttttggaaatctagcatg
tggattcatgtgtgtcatgtaagacgaaaggatcttcctgactttgtcttctcgggagga
gtacgtcctgctcagcctgcaaaaagtgaaagccgttcaggctcaagatcgcttggctct
gctaaaacaacatctccagatgctgcttctagcagaaagagaaaacatgacgaagttaat
accggttttagcccaaaagacagtgatgccagctcaccaggtgaaactagagagttgaaa
cactttgaagccgatattggtgatacttcgagtactacgcttgttgataaccaagttgaa
gtttctatcaaaagcacattgcctgtgcctgcatctggtgctgctgtaacagagacaata
acagtcgtgcaatctgcagaactgactgtgagccagcaaagtggaccccatggtgttgaa
gatcttgggtatgacctggagttgacaaatggagttaagcattttgatggggctgatgag
ctgcagacagagccccctacaccagagcaaattgttggggcagcaacatcagaggaaaag
gacagaattggtggttctagcaataatgtcctgcaaagcgagggcttggaagaacttgag
ccgattgagccagcaccgtcctccagcattgcatctgctgcatttgtggttcctcagaag
cctctcattaggttcaattttacttctttgcggaaaacaactgagagcacatga
DBGET
integrated database retrieval system
