Solanum verrucosum: 125822244
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Entry
125822244 CDS
T11474
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sver Solanum verrucosum
Pathway
sver00040
Pentose and glucuronate interconversions
sver01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125822244
Enzymes [BR:
sver01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125822244
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NikR_C
Motif
Other DBs
NCBI-GeneID:
125822244
NCBI-ProteinID:
XP_049357582
LinkDB
All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MAKSTNSLQILSWLLIICSFFTIVASKSSTDEEETKSISYDPLPHKNGLLNVIDSCWRWK
GDWSSNRKALADCAIGFGSSTIGGKYGDIYIVTDSSDDPINPKPGTLRYGAIQSEPLWII
FKRDMILTLKNELMVNSYKTIDGRGAKVEISNGPCITLDYVTNVIIHGISIHDCKPGKKG
MVRSSPEHVGERLGSDGDAISVFTSSNVWIDHCYLARATDGLLDVIHASTAVTISNNYFT
EHDKVMLLGHNDEYTADRNMKVTVVYNHFGRELVQRMPRVRHGYAHVANNYYDQWLMYAI
GGSADPTILSEGNYFIAPDKAYNKEVTKRETEDEGWKSWKWRSSNDMFMNGAYFLPSGYG
SIAPKYTRGQSFIVAHGAFTPSLTSNAGPLQCVVNEPC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaactaattccctccaaatactttcatggcttctaattatttgttctttt
ttcaccatagtagctagtaaatcaagtactgatgaagaggaaactaaatcaataagttat
gatcctctgcctcacaaaaatggcctcctcaatgtcattgattcgtgttggagatggaaa
ggcgattggtcatccaatcgaaaggctttagcggattgtgcaataggctttggaagtagt
accataggtggtaaatatggtgacatttatattgtcactgactcttctgatgaccctata
aatcctaaaccaggcacacttaggtatggtgcaattcagtctgagccactttggatcatt
ttcaaaagggacatgatacttacacttaaaaatgaacttatggtgaatagttataagact
atagatggcagaggagcaaaagtggaaatctctaatggtccatgtatcacattggactat
gtcacaaatgttattattcatgggattagtatccatgattgtaagcctggtaaaaagggt
atggttaggagtagtcctgaacatgttggtgaaagattaggctctgatggtgatgctata
agtgtgtttacatcgtcgaatgtttggattgatcattgctatcttgctcgtgcaacagat
ggtctactcgatgttattcatgcttcaactgcagtaaccatttccaacaattacttcact
gaacatgacaaagttatgttattgggacacaacgatgaatatactgcggacagaaacatg
aaagtcacagtagtttacaaccattttggccgtgaattagttcaaagaatgccaagggtt
aggcatgggtatgctcatgtggccaacaattattatgatcaatggttaatgtatgccatt
ggtgggagtgcagatccaacaatattaagtgaaggaaattatttcattgctcctgacaaa
gcttacaacaaagaggtcaccaagagggagactgaagacgaaggatggaaaagttggaaa
tggaggtcctccaatgatatgtttatgaatggagcttattttcttccatctggatatgga
agtattgctccaaaatacacgagaggacaatcgttcattgttgctcacggagcatttact
ccctctttaacttccaatgctggtcctcttcaatgtgttgtcaatgaaccttgctaa
DBGET
integrated database retrieval system
