Solanum verrucosum: 125823433
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Entry
125823433 CDS
T11474
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125823433
Spliceosome [BR:
sver03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125823433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RL
RRM_PARP14_3
RBD_AKAP-17A
UNC45-central
Motif
Other DBs
NCBI-GeneID:
125823433
NCBI-ProteinID:
XP_049358774
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MSDPSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVKALQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNAQGRGDEPNRILLVTIHHMLYPITVDVLHQV
FSPHGFVEKIVTFQKSAGFQALIQYQVQQSSVSARNSLQGRNIYDGCCQLDIQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSSQQGYGDMYSFQGSGAHPGGFPQMGNAEAIAAAFA
GGLPPGISGTNDRCTILVSNLNSDRINEDKLFNLCSLYGNIVSIKILRNKPDHALVQLGD
GFQAELAVHFLKGAMLFEKRLEVNFSKYPNITTGPDTHDYSNSNLNRFNRNAAKNYRYCC
SPTKMIHLSSLPQDVTEAEIIAHLEEHGPIINSKLFEMNGKQQALVLFDKEEQATEALVC
KNATSLGSSTIRISFSQLQSI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccttcaaaggttgttcatgttcgcaatgtggggcatgagatctcggagaat
gacttgcttcaactattccaaccatttggcgtaattaccaaacttgtaatgcttagggca
aaaaatcaggccctcttgcaaatgcaagatgtcccttcagctgtaaaggcattgcaattc
tactcaaatgttcaacccagcataagggggaggaatgtttacgttcaattctcatctcac
caagaattgacaactatggatcagaatgcacaaggccgtggagatgagcctaatcgaatt
ctcttagtcacaatacatcacatgctataccctataaccgtggatgtgctgcatcaagtg
ttttctccacatggatttgtagagaagattgtcacatttcagaagtcggctggttttcaa
gctttgatccagtatcaagtacaacagagttctgtttctgcaaggaactcacttcagggg
cgtaatatatatgatggctgctgtcagcttgacatacagttctctaacctagatgaattg
caagtgaactacaataatgaacgttcaagggacttcactaacccaaatctaccatcagaa
cagaagggcaaatcctctcaacaaggatatggagacatgtactccttccaaggttctgga
gctcatccaggtggatttcctcagatgggaaatgcagaagcaattgcagctgcgtttgct
ggtggtttgccacctggaattagcgggacaaatgacagatgtactattcttgtttctaat
ttaaattcagatagaataaatgaggacaaactttttaacctgtgctctctttatggaaat
attgtcagcattaagattctgcgcaataaaccagatcatgctttggttcagctgggtgat
gggttccaggcagagctggctgttcactttttgaagggtgccatgttatttgaaaagcgt
ctggaagtcaacttctcaaagtaccccaatattactacagggccggacacacatgactac
tcaaattcaaatctcaaccgctttaaccgtaatgctgctaaaaactataggtattgctgc
tcccctaccaagatgatccacctatcctccttaccccaggatgtaacggaggcagagatt
attgcacatttggaggagcatggtcccatcatcaatagtaagctttttgagatgaatggc
aaacagcaagctcttgttctttttgacaaggaggagcaggcaactgaggcactcgtatgc
aaaaatgctacatctcttggtagctcaaccatccggatttcattttctcagttacagagc
atctga
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