Solanum verrucosum: 125824529
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Entry
125824529 CDS
T11474
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
sver Solanum verrucosum
Pathway
sver03440
Homologous recombination
sver03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125824529
03450 Non-homologous end-joining
125824529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sver03032
]
125824529
03400 DNA repair and recombination proteins [BR:
sver03400
]
125824529
DNA replication proteins [BR:
sver03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
125824529
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
125824529
BRCA1-C complex
125824529
NHEJ (non-homologous end-joining)
MRX complex
125824529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
125824529
NCBI-ProteinID:
XP_049359889
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MDDTSRDEGSNTIRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEKKQVDFVLLGGD
LFHENKPSRATLVKAIEILRRYCLNDRPVQFQVVSDQTVNFANLFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMDLGGSGVGQIALHPILIRKGLTSVA
LYGLGNIRDERLNRMFQTPHAVQWIRPEAREGCQVSDWFNILVLHQNRLSKDKSKNAINE
HFLPRFLDFIVWGHEHECLVDPQEVPGMGFHITQPGSSVATSLIEGESKQKHVLLLEIKG
NQYRPTKIPLNSVRPFEYTEVVLKDEPDIDPNDHSSILEHLDKVVKKLIERSSQKANNGS
VVKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKKFGKEAKFDDSERL
RPEELNQQNIEALVAESNLKMEVLPVSDLDIALHNFVNKDEKMAFYSCVQYNLEETRSKI
ARDSDPVKFEEYDIILKVGECLEERVKQRTERNKDDQPFSFSGQSLEDIRGKSTGVGSAV
SFSDDEDASMLSASKSTAGKGKKESSQSFRSSREASEVGKTSSRGRGRGRGRGRASNSLK
QTTLDASLGFRQSQRSASIAASASVRSIAADDENVESPSSDEDAKQDTNVIDESSDDDKT
VQAKGRKRAAPRGRGRGSATAAKRGRKPDSSSSSLQRMLMDVNIDDDDDDDDMTKKEKRP
QPRATRNYGALRR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggacgatacttcaagggatgaggggagcaacaccattaggatcctggttgctacagac
tgtcacttgggctatatggagaaggatgaagtacgtaggcatgattcatttcaggcattt
gaagagatatgttcaatcgcggagaaaaaacaggtggactttgtgcttctcggtggtgat
ctgtttcatgagaataagccatccagggcaacactggtaaaagccattgagattcttcgc
cgctattgtctcaatgatcgaccggtgcaattccaagttgttagtgaccagacagtgaac
tttgctaacctatttggtcatgtaaattatgaagatcctcactttaatgtggggttgcct
gttttcagcattcatggcaatcatgatgatccagctggtgtggacaacctatctgcagtt
gacatcctttcggcatgcaatcttgtcaactattttggtaaaatggatctcggtggttct
ggtgttggacagatcgctctgcaccctattcttatcaggaagggtttaacatcagttgct
ctttatggtcttgggaatatcagagatgaacggttgaatagaatgtttcaaacaccacat
gctgtgcaatggatacgacctgaggctcgggaagggtgtcaagtatcagactggttcaac
attttggtacttcaccaaaataggttgagtaaagacaaatccaaaaatgcaataaatgag
catttcctgcctcggtttctggattttattgtgtggggtcacgaacatgaatgtttagtg
gatcctcaggaggttccaggtatgggttttcacattactcagccaggttcatctgttgcg
acatcactgattgagggcgaatcaaaacaaaaacatgtacttttattagaaattaaggga
aatcaatatcgtccaacaaagatacctctgaactcagtgcgtccttttgaatatactgag
gttgtgctgaaggatgaacctgatattgatcctaatgatcacagttcgattcttgaacat
ttggataaagtagtcaaaaagttgatagaaagatctagtcaaaaggctaataatggatct
gttgtaaagctccctttagttcgagtaaaggtagactactctgggtttatgactataaat
cctcaaaggttcggacaaaaatatgtggggaaggttgccaatccacaggatattctcata
ttctcaaaatcttcaaaaaagtttggcaaggaagctaaatttgatgattctgagcggctt
cgccctgaagaattgaatcagcaaaacattgaagctttagttgctgagagcaatttgaaa
atggaggtacttccagtgagcgatctggacattgccctgcacaattttgttaacaaggat
gagaaaatggctttttattcttgtgtacaatacaaccttgaggaaactcgaagcaaaata
gctcgtgattcagatccggtgaaattcgaagaatatgatataattttaaaagttggagag
tgcttagaggaacgcgtcaaacaaagaactgaaagaaataaagatgatcaacctttctcc
tttagtggacagtctttggaggatattagaggcaaaagtactggagtaggatctgcagtt
tcattcagtgatgatgaggatgcctctatgctctccgcctcaaagtctactgctggaaaa
ggaaagaaagagtcatctcaatcttttagatcctctcgtgaagcttctgaagttggcaag
acctcttcaaggggaaggggtaggggtagaggcagaggaagggcttccaatagcttgaag
cagacaacccttgatgcatctctgggattccgtcagtcacagagatctgcatcaattgcc
gcatctgcgtcagtgcgaagtattgccgcagatgatgagaatgtggaatctccttcaagt
gatgaagatgccaaacaggacactaatgttattgacgaaagctcagatgatgataagaca
gttcaggccaaaggacgcaaaagggctgctccaaggggaaggggtagaggttcagcaaca
gcggctaaaaggggaagaaaaccagatagctcctcatcttcacttcaaaggatgctcatg
gatgttaatatagatgacgatgatgatgatgacgacatgacaaagaaagagaaaagacct
caaccacgggcaactaggaattatggtgctttaaggaggtga
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integrated database retrieval system
