Solanum verrucosum: 125824809
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Entry
125824809 CDS
T11474
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 2, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sver Solanum verrucosum
Pathway
sver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125824809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125824809
03016 Transfer RNA biogenesis [BR:
sver03016
]
125824809
Enzymes [BR:
sver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
125824809
Messenger RNA biogenesis [BR:
sver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
125824809
Transfer RNA biogenesis [BR:
sver03016
]
Prokaryotic type
tRNA degradation factors
125824809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_PNO1_2nd
OB_PDCD11
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
125824809
NCBI-ProteinID:
XP_049360152
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MVSVRNKINPLLCNLPYVLTWRRFGFRTICSGRLGFAPSTSPSMADTDIPVAGTKVLETF
SQEFEIGSRKITLETGKIARFANGSVILAMEETKVLSTVASSKGDALRDFLPLTVDYQEK
QSAQGVIPTTYMRREDAPKERELLCGRLIDRPIRPLFSPGFYHEVXVMASVLSSDGKQDP
DILAANASSAALMLSDIPWGGPIGVIRIGRISGQFVVNPSMEELSISDLNLVYACTRDKT
LMIDVQAREISEKDLEAALRLAHPEAVKHLDPQIRLAAKAGKQKKEYKLSMVSEKTFEKI
QNLANEPIEAVFTDPTYGKFERGEALEKITQDVKRALKEEGDEEGLKILPKTVDTVRKQV
VRRRIISEGLRVDGRRLDEVRPLYCEAGNLPVLHGFAIFSRGDTEVFCTVTLGAPGDAQR
LDSLVGPSSKRFMLHYSFPPFCTNEVGKQTGLNRCEVGHGTLAEKALLAVLAPEDDFPYA
VRINSEVMASDGSTSMATVCGGSMALMDSGIPLIEHVAGLLMGLVSEVDPSTGEIKDYRL
LTDILGLEDHLGDMDFKIAGTRNGVTAIQLDIKPAGIPLDIRCESLDPALKGRLQILGHM
EREISAPRIQDDIYSPRLVTSKYSNDALRRLIGPVGALKRKIEDETGARISVSDGTLTII
AKNQSVMEKVQEKVDFIIGREIEIGGVYKGIIVSVKEYGAFVEFNGGQQGFLHISELSHD
PVSRVSDVVSVGKQLSLMCIGQDVHGNIKLSLKATLPRPKSKTGISVDEPTSQEVNVWAA
IEDVSNEQKNQGATVGPETNXPAVLIRSAPECDKEEKSDALNSKGDNGSQSASKSEKKTR
IPSSLFESGFSSRSAKKSKRGKDAILDLISDDESEQKHTPEVGLHSQIGSDKDDATSETP
MSANKLKLGMRLTAKVHQIRALGLVLDLGGGIRGMYRFEPGMKRDFEVGDELWVKCSSFS
TKGIPVLSLVKEE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctgtaagaaacaaaataaacccacttctctgcaacttaccgtacgttctcaca
tggcgaagatttggttttcgtacaatctgcagtggtcgtcttggctttgcgccgtccaca
tcaccgtcaatggctgatacagatattcctgttgctggaacgaaggttctcgagacattt
tctcaggaatttgagattggatcacgcaaaattactttagaaactggaaagattgcgagg
tttgctaatggctctgtaattttagccatggaagagacgaaagtcctctctactgtcgct
tcatctaaaggcgacgcacttcgtgattttttgcctcttacagttgattaccaagagaaa
caatctgctcaaggtgttattccgacaacatacatgaggagagaagatgctccaaaagaa
cgtgaacttttatgtggtcgtcttattgatcggcccataaggccacttttttcacctgga
ttttaccacgaggtgtaggtaatggcaagtgtgctttcgtctgacgggaaacaagatcca
gatatattggcagctaatgcatcatctgctgctctaatgttgtcagatattccttggggt
gggccaatcggagtaatacgtattggaaggatttcaggtcaatttgttgtaaatccaagc
atggaggagcttagcatcagtgatcttaacttggtatatgcatgtacgagggataaaact
ttgatgatagacgtccaagctcgtgaaatttctgaaaaggatttagaagctgctttgaga
cttgctcatccagaggctgttaagcatcttgaccctcaaattagactcgcagctaaagct
ggtaagcagaagaaagagtataagctgtctatggtatcagaaaaaacatttgaaaagatt
cagaatctggccaacgaacctatagaagctgtttttacagaccctacttatggaaagttc
gagcgtggagaagctttagaaaaaatcacacaagacgttaaaagagctcttaaggaagaa
ggtgatgaggaaggcctaaaaattctaccaaaaacagttgatacagtgaggaagcaggtt
gttcgcagaaggatcatttcagaagggcttagagtggatggaaggcgtcttgacgaagtt
cggcctttgtactgtgaagctggtaatttacctgtattacatggatttgcaatcttttca
agaggggatactgaggtcttttgcactgttacccttggagcccctggggatgctcaacgt
ctggattcactggtcggtccttcaagcaagcgtttcatgctgcattatagttttccacca
ttttgtacaaatgaagttggaaaacaaactggcttgaataggtgtgaagttggtcatggc
actcttgctgaaaaggctctgcttgctgtattagctcctgaagatgattttccatatgca
gtccgaatcaattctgaagtcatggcatctgatggctcgacatcaatggcaactgtctgt
ggaggtagcatggctttgatggattctggcattccactaatagaacatgtagcaggtttg
ttgatggggcttgttagtgaagttgacccatcaactggtgaaatcaaggattatcgttta
ttgactgatattttgggtctggaggatcatctgggtgacatggattttaagattgctggt
acccgtaatggtgtaactgcaatacaattagatattaaacctgctggaattcctttggat
atcagatgtgagagtctagatcctgcacttaaagggaggcttcaaatccttgggcacatg
gagcgtgagataagtgctccacgtattcaggatgacatatattctcctcggctagttacg
tcaaaatacagcaatgatgcacttcgtcgcttgattggtcctgttggtgctttgaagagg
aaaattgaagatgaaacaggtgcacggatctccgttagtgatggaacacttactataatt
gccaaaaaccagtcggtgatggagaaagtacaggagaaggttgattttataattggacgt
gaaattgagattggaggcgtatataaaggtattattgtatctgttaaagaatacggcgcc
tttgtggagtttaatggtggacaacagggcttcttacatatttcagaattgtcacacgac
ccggtttccagagtttcagatgtggtatctgtgggaaagcaactttctttaatgtgtata
ggacaggacgttcatggcaatattaagttatcattaaaagccaccctgcctagacctaaa
tctaagacaggcatttctgttgatgaacctactagtcaagaggtcaatgtttgggctgcc
attgaggatgtatccaatgagcaaaaaaaccaaggtgctactgtgggacctgaaactaac
nnaccagcagttctaatccgaagtgcgcccgagtgtgataaggaggaaaaaagtgatgct
ctgaattcgaaaggtgataatggatctcaaagtgcttctaaatctgagaagaagacaagg
ataccgtcctcactttttgaatccggtttttcttctagaagtgctaagaagtccaaaaga
ggcaaggatgccattcttgacctaataagtgatgatgaaagtgagcagaaacatactcct
gaagtaggcctgcattcccagattgggtcagataaggatgatgctacgtctgagacccct
atgagtgcaaacaaactaaagcttggtatgagattaacagcaaaagtgcatcaaattcgt
gcccttggtttggtgcttgatttgggtggtgggattcggggaatgtatcgttttgagcct
ggtatgaagagggactttgaggtgggtgatgagctgtgggtgaagtgctcaagtttttca
accaaagggattccagtattgtctttggtgaaagaagagtaa
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integrated database retrieval system
