Solanum verrucosum: 125825080 Help Entry 125825080         CDS       T11474                                  Name (RefSeq) coatomer subunit alpha-1-like   KO K05236   coatomer subunit alpha Organism sver  Solanum verrucosum Brite KEGG Orthology (KO) [BR:sver00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sver04131]     125825080   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:sver04147]     125825080 Membrane trafficking [BR:sver04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     125825080 Exosome [BR:sver04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    125825080   Exosomal proteins of bladder cancer cells    125825080 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st TPR_COPA_B EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD_LRWD1 Fis1_TPR_C zf-CHCC Aa-Ago_N Motif Other DBs NCBI-GeneID:  125825080 NCBI-ProteinID:  XP_049360382 LinkDB All DBs Position Unknown AA seq 1219 aa AA seqDB search MLTKFETKSNRVKGLSFHTQRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDLLR LSQMNTDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE VDTLRGHMNNVSCVLFHPRQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILASHP EMNLLAAGHDSGMIVFKLERERPAFSVSSDSLFYVKDRFLRVYEYSTQKDTQLIPIRRPG SNNVNQGPRTLSYSPTENAVLICSDTDGGSYELYIVPKDSYGRGDTVQDAKRGTGGSAVF VARNRFAVLEKSTNQVLVKNLKNEIVKKSLLPMATDAIFYAGTGNLLCRAEDRVVIFDLQ QRIILGDLQTSFIRYVVWSPDMESVALISKHSIIIADKKLVHRCTFHETIRVKSGAWDDN GVFIYTTLTHIKYCLPNGDCGIVKTLDVPVYITKIYGNTIFCLDRDGKNRPIIIDSTEYV FKLCLLRKRYDQVMSMIRNSELCGQAMISYLQQKGFPEVALHFVKDERTRFNLALESGNI EIALESAKKIDEKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNVEKLSK MMKIAEVKNEVMGQFHDALYLGNVRERVKILENAGHLPLAYITATVHGLSDTAERLAEEL GDNVPSLPKGKKASMLLPPTPILGGGDWPLLMVTKGIFEGGLDIAGRGGQEEYEEAADAD WGESLDIGEVENLQNGDISMVLGDEEGQEGNDDEEGGWDLEDLDLPPDTDTPKTTSNARS SVFVTPTPGMPVSQIWVQKSSLAAEHAAAGNFDTAMRLLSRQLGIRNFSPLKSLFIDLHV GSHTHLLAFSSAPVISVAIERGWSESASPNVRGPPALIFSFAQLEEKLKASYKATTGGKF SDALRLFLSILHTIPLIVVESRREVDEVKELIVIVKEYVLGLQMELKRKELKDNPIRQQE LAAYFTHCNLQLPHLRLALQNAMSICYKAGNLSSAANFARRLLETNPTNESQARTARQVL QAAEKNMRDVTQLNYDFRNPFTVCGATYVPIYRGQKDVTCPYCGTHFVLSQQGELCTVCD LAVVGADASGLLCSASQIR NT seq 3660 nt NT seq  +upstreamnt  +downstreamnt atgctgaccaagtttgaaaccaagagtaatagagtgaaaggtttgagttttcacacccaa aggccatggatcttagccagtcttcatagtggggttattcagctatgggattaccgtatg ggaactctcattgatcgatttgatgagcacgatggccctgttcgcggtgtccattttcac aaatctcagcctctatttgtttctggaggagatgattacaaaattaaggtttggaactat aagctgcatcggtgcttgtttaccctgcttggacatcttgattatattcgaactgttcaa tttcaccacgaatatccatggattgttagtgcaagtgatgaccagactattcggatatgg aactggcagtctcgtacttgtatttctgtcttgactggccacaatcattatgtaatgtgt gcctcatttcatcccaaagaggacttggttgtctctgcttctttggatcagactgttcgt gtctgggatattggtgccctaagaaagaaaaccgtttctcctgctgatgatctcttgcgg ttgagtcagatgaatactgacttctttggtggagtggatgctgtggtgaagtatgtcttg gagggtcatgatagaggggttaactgggcatcatttcatcctacactcccccttatagtt tctggtgcagatgatcgccaagtgaaaatttggcggatgaatgatacaaaagcttgggag gtggacacattgagaggacacatgaacaatgtttcatgtgtgttattccatccaaggcaa gatattattgtttcaaattcagaggataagagcattcgagtgtgggatgcaacaaaaagg actggtcttcagactttccgcagggagcatgatagattttggatccttgcttctcatcct gagatgaatcttctagcagctggacatgacagtgggatgatagtattcaagttagagaga gaacggcctgctttttctgtgagcagtgattctttattttatgtaaaggatcgctttctc cgtgtatatgagtattcaacccagaaggacacacagttgataccaattagaaggcccggt tcaaacaatgtgaatcaaggtccacgaactctttcatacagtccaacagaaaatgctgtc ttgatatgttcagacacagatggtggttcctatgaactttacattgtacccaaagatagt tatggtaggggtgatactgttcaagatgcaaaaagaggaaccggaggatcagctgtgttt gttgcccgaaacaggtttgcggtacttgagaagagcactaatcaagtcctggtaaaaaat ctcaagaatgaaattgtcaagaaaagccttcttcctatggcaactgatgcaatattttat gctggcactggaaacttactatgtagggcagaggatagagttgtcatttttgatctccag cagagaattattcttggagatctccagacttctttcatcaggtatgttgtttggtcacct gatatggaaagtgtcgctttgattagcaagcactccataattatagctgataagaagctt gtgcaccgttgcacctttcatgagacaattcgtgtcaaaagtggtgcctgggatgacaat ggggtattcatatataccacacttacccacattaagtactgtcttcccaacggggattgt ggaatcgtcaaaaccctagatgttcctgtctatattacaaaaatatatgggaacactatc ttttgcttggatagagatggcaaaaaccgtcctattattattgattcaactgaatatgtt ttcaagttgtgtctgcttagaaagagatatgaccaagttatgagtatgataagaaactca gagctctgtggtcaggccatgatttcatatttgcagcagaagggttttccagaagttgct cttcattttgtgaaggatgagcgcactcgtttcaacttagcacttgaaagtgggaatatt gagatagctcttgaatctgctaagaagattgatgaaaaagatcattggtataggcttggc gtggaagcccttcggcagggcaatgcaggtattgttgaatatgcctaccaaaagacaaag aattttgagaggctctctttcctatatctaataactggaaacgtggagaagttatctaaa atgatgaaaattgctgaggtaaaaaatgaagtaatgggtcagttccatgatgccttgtac ctcggtaatgtccgcgagcgtgttaaaattttggaaaatgctggtcatctgccccttgca tacatcacagctacagtccacgggctcagtgatactgctgagcgtcttgcagaggaactg ggggataatgttccatcattgccaaaggggaagaaagcttcaatgttgcttcccccaact cccatcttgggtggtggagactggcctttgctgatggtaacgaaagggatatttgaaggt ggtctggatattgcaggcaggggaggacaagaggaatatgaagaggctgcggatgcagac tggggtgagtcattggacatcggtgaggtggaaaatctacagaatggggacatcagtatg gtgcttggtgacgaggaaggacaagaaggaaatgatgatgaggagggtggatgggatctt gaggatctggatctgcctcctgatacagacacacctaagactacttccaatgctcgctct tctgtgtttgtcactccaacacctggcatgcctgtcagccagatttgggtccaaaaatca tctctagctgctgaacatgcagctgctggaaattttgatactgctatgcggttgttgagc agacaactaggaattaggaacttctctcctttaaaatcattgtttattgatcttcatgtg ggaagccacactcatctgcttgccttctcctcggcgccggtcatctccgtggcaattgag agaggttggagtgagtcagctagtcctaatgttcgaggtccacctgctcttatattcagt tttgctcagttggaggaaaaacttaaagcttcttataaggcgactactggtggaaaattt tctgatgcacttagactattcctgagcatccttcacaccattcctctgattgtggttgag tcgagacgagaagtggatgaagtcaaggaattgattgtcatagtgaaagagtatgttttg ggtttgcagatggagcttaagaggaaggaattgaaagataatcctattcgccagcaggaa ctggcagcttatttcactcactgtaatctgcagcttcctcacttgagacttgcattacag aatgctatgtctatctgctacaaggctggaaatcttagctcagcagccaactttgctagg agactgttggagaccaatcccaccaatgaaagccaagccagaacagcccgccaggttctg caggcagctgagaaaaatatgcgagatgttacacagttgaattatgatttcagaaatcct tttacagtctgtggggcaacatatgtcccgatataccggggtcagaaggatgtcacttgt ccttactgtggtactcattttgtactgtctcagcaaggggagctttgtactgtttgtgat cttgcagttgttggagccgatgcctctggtttgctttgctcggcatcacaaatcaggtga

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