Solanum verrucosum: 125826788
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Entry
125826788 CDS
T11474
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125826788
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
125826788
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
MOEP19
KH_KhpA-B
Kelch_HCF
Motif
Other DBs
NCBI-GeneID:
125826788
NCBI-ProteinID:
XP_049362087
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MVYSTVTDSSFPPAIQGSSAVAPPPPESFAVKSGVTGSVATEMVAVRPEAAGESVAIVQK
WPGWPGDNVFRLVVPLAKVGGIIGRRGELVKRMCEETGASIRVLEGPLGNADRIVLISGR
ENPDAEVSPAMDAALRIFKRVAGLNNDDPGAGAAGAAFCFSRLLVASSQANHLIGRRGTT
IKSIQERSGAALRVLSADDVAPYATEDERIIEIHGEGLKVLDAFEAVVRLLRKFLVDHSM
IPVIEKMYNVNISQDRLAESWADKPQSSKFQPSGPAPASHAAAVSGYSFSMSRDPYLLDC
ETAMDSELPRSTLPRYGQDPRLGGIHTSVAGRAGPIVTQITKVMQVPLGYAEDIIGVGGG
NIAYIRRTSRAALTVQESRVPEEITIEIKGTSSEVQAAEQLIQEFINNHKEPAPRMYGTR
EPEFGSFSRYGDPYSSSSSFPSQSFEGYGSSSLGAGYNRYRY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtgtactctactgtaactgattcatcatttccaccggccattcaaggctcatctgcg
gtggcgccgccgccgccggagtcgtttgctgtaaaatctggggttacaggttcggttgct
actgaaatggttgctgttagaccagaggctgctggggaatcggttgcgattgtgcagaaa
tggccgggatggccgggggataacgtgttcaggctagttgtgccacttgcgaaagttggt
ggtataattgggcggaggggcgaacttgtaaagaggatgtgtgaagagactggcgccagc
attcgtgttctggaaggccctcttggcaatgctgatcgaatcgtcctaatatctggtaga
gaaaatccagatgctgaggtatctccagcaatggatgctgctttaagaattttcaagcgc
gttgccgggctaaacaatgatgatccaggagcaggagctgctggtgctgcattctgcttt
tcaaggttattggtggcttcatcacaagccaatcatttgattggtagacgtggtactacg
atcaaatcaatacaggaaagatcgggtgctgccctgagagtcttatctgcagatgatgtg
gccccttatgccactgaagatgaaagaattatcgaaattcatggagaaggtttgaaggtg
cttgatgcttttgaggcagtagttagactactgagaaagtttttggtcgatcatagtatg
atacctgtaattgaaaagatgtacaatgtaaatatctctcaagatcggctagcggagtcc
tgggctgataaaccgcagtcctcaaagtttcagccttctggtcctgcacctgcatcccat
gctgcagcagtttctggttattccttctccatgagccgagacccttacttacttgattgt
gaaactgccatggactccgaactcccgcggtctacactaccgcgatatggacaggatcct
cgacttggcggcatacatacttctgtggctggccgagctggtcctatagttacacagatc
acaaaggttatgcaagtaccgctggggtatgctgaggacatcattggtgttggtggcggt
aatatagcatatattcgccgcacaagtagggcagctcttactgtgcaagagagccgagta
cctgaagaaatcactatcgagattaagggtacctcgtcagaggttcaagcagctgaacag
cttattcaggagttcattaacaaccacaaagagccagccccaagaatgtatgggacgcgt
gagcctgagtttggatctttttcgcgttatggtgacccctattcttcatcatcttcgttt
ccatctcagagttttgaggggtatggatcttctagtttaggagcaggatacaacaggtat
agatactaa
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