Solanum verrucosum: 125827220
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Entry
125827220 CDS
T11474
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sver01001
]
125827220
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sver04121
]
125827220
Enzymes [BR:
sver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125827220
Protein kinases [BR:
sver01001
]
Serine/threonine kinases: Other
Other
125827220
Ubiquitin system [BR:
sver04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
125827220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WDR55
LisH
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
LisH_PAC1
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
125827220
NCBI-ProteinID:
XP_049362543
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MEEEPQQQSLAAEGEEERQTETAPTEEHEEEGEEAGGGEEDEEEAESEGLIIKAQALMEK
ITALPDNPNPNTIHALSSIFETQEASYMEESGHSAPNNGRSSHNVGRLGNLIRDNDEFFE
LISSKFLSERRYSVSVKAAAARLLFSCSLTWMYPHVFEDPVLENLKSWTTDDTTRLSGDD
HYWKHESGDRRSSDSEMLKTYSTGLLAVCLASGGQVVEDVLTSGLPAKLMHYLRIRILGE
TTTSQRDATSLLDGKASSTGTGVRAREECRSRFRQVAESSHLDIPRVAEDGLHGDQVLDK
DRDRSASRHMRGDELWTNEEPPDSMAVDDDNYQADGDGEERWHIRDLRDGKAKPGNRSVR
EDEHDESARDDLSRRRVNRGWTRHRGRGRVTEGVPDNEAALTSPGSASRLSGQSRSRNLT
RNQELRRAPDNKKNLSRTNVDGFVMERDENDECFRECKVGSKDITDLVKKAVGAAETEAK
TANAPAEAVKAAGDAAAEVVKSAAFEEFKKSNDEEAAVLAASKAASTVIDAAIAVEVSRS
AISEGESQDIKATAQEANEDVDEFFILDNDSLAKLREKFCIQCLIVLGEYVEVLGPVLHE
KGVDVCIGLLQRNSKHIEGCKLSLLLPDVLKLICALAAHRKFAAVFVDRGGMQKLLAAPR
APQTFCGLSSCLFAIGSIQGIMERVCTLPSSIIHQVVELALQLLECPQDLARKNSALFFA
AAFVFRAVVDAFDAQDGLQKMLNLLQDAALVRSGASSGALTASGSLRSDRLPPEVLTASE
KQIAYHTCVALRQYFRAHLLLLVDSIRPNKSVRSAGRNIPSVRAASKPLDISNEAMDAVF
RLIQKDRRLGPAAVRARWPVVDKFLNCNGHITMLELCQAPPVERYLRDLLQYALGVLHIV
TLVPYSRKLIVNATLSNDRVGIAVILDAANSAGYVEPEIVEAALNVLVCLVCPPPSISNK
PSVSTQAQQTNAVQSASTPGVETRDRNADRNETRDRNAERFLPDRAVNISSQNENRESTL
SDRGSTAVPATSAVSGTSQGPVSTMTSGLVGDRRISLGAGAGCAGLAAQLEQCYRQAREA
VRANNGIKVLLQLLQPRIVTPPAAIDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSE
LIRDSGNQTPGSEQNRWQAELAQVAIELIGVVTNSGRASSLAATDAATPTLRRIERAAIA
AATPITYHARELLLLIHEHLQASGLTDTATMLLKEAQLTPLPSLAAPSSLAHQTSGQETS
SVQIQWPSGRAPRGFLSAKPKLPSLDEDGGLKSESIVCSSRRKPLAFSSSRSVSSKSLPV
DVSPSTSGCKFSNSKKCATPVATSETPSLSTVKSGGDPDIMFKTPIVLPMKRKLTDLKEG
GSVASVKRLNTGEHTVRSPVCVTPNSFRRSGLPSDPNVPSTPNSTLREIHNRPGSSAFPT
EGDDTPMVSSSQHGLLSDSQPSNAERLTLDSVVVQYLKHQHRQCPAPITTLPPLSLLHPH
VCPEPKRSLDAPSNVTSRLSTRDFRSLNGGTHGKRKDRQFVYSRFRPWRTCRDDAGVLLT
CVSFMGDSSQIAAGTHSGELKIFDSNSSSILESFTSHQAPLTLLQSYLSVETQLLLSSSA
HDVRLWDATSVSAGPKHSFEGCKAARFSNFGTTFAALSAEQSRREILLYDTQTCQMELKL
TDTSNIPSGRGHMYSLAHFSPSDNMLLWNGVLWDTRGSGPIHRFDQFTDYGGGGFHPAGN
EVIINSEVWDLRNFRLLRSVPSLDQTVITFNASGDVIYAILRRNLEDVMSAFQTRRVKHP
LFAAFRTVDAVNYSDIATIPVDRCVLDFATEPTDSFVGLVTMDDQDEMYSSARVYEIGRR
RPTEDDSDPDDAESEDEDEDDDDDIDDEVILGTDLDGDGESDADDLSNDDDSVSELDDEE
DEDGDFIVDGVDFGGGGILEIVTDGEDEDDSELVESFSSGDDDDDDLL
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagccgcaacaacaatcattggcggcggagggggaagaggagcggcagacg
gagacggctccaacggaggaacatgaggaagaaggagaagaagcgggaggtggagaggaa
gatgaagaagaggcggaaagtgaagggttgatcattaaggcacaagcgttaatggagaag
ataactgccttgcctgataaccctaacccaaatactatccatgctctttcttctattttt
gaaacccaagaagctagctacatggaagagagtggtcattctgctcctaataatggacga
tcttcccataatgttggacggctagggaaccttatccgggacaatgatgaattctttgaa
ctgatatcttcaaagttcctatctgagaggagatattcagtttctgtgaaggctgctgct
gcaaggctgctttttagctgttcactaacatggatgtatccacatgtttttgaagaccct
gtgctggaaaatttaaaaagctggacaacggacgacacaaccagattgtctggtgatgat
cattattggaagcatgagtcaggtgatcggaggtcctctgattctgagatgctgaagacc
tactctactggacttcttgctgtatgtttggcaagtggtggtcaagtagtcgaagatgta
ttaacatctgggctcccagcaaaacttatgcactatcttcggattagaattttgggggag
accaccacaagccaaagagatgcaacatctttgttggatggcaaagcatcatctacaggt
actggtgtgagagctagagaggaatgtagaagtagatttcggcaagttgccgaaagttct
catttggatatccccagagtagcggaagatggacttcatggtgatcaagttctggataag
gatcgcgatagaagtgccagtaggcatatgcgtggggatgaactttggacaaatgaagag
ccacctgattctatggctgtggatgatgataattatcaggcagatggagatggtgaagaa
agatggcatattagagatttacgtgacggaaaggcaaagcctggtaacagatccgtaagg
gaagacgaacatgatgagagtgctagagatgatttgtcaagacgcagggtgaatcgtggg
tggacaagacacagaggacggggaagggtgactgagggtgttccggataatgaagcagct
ttgacctctccagggtctgctagtagattgagtgggcaatctcgcagcagaaatttaacc
cggaatcaagaattgagaagagcacctgataacaagaagaatttgagtaggacaaatgtt
gatggttttgtgatggagagggatgaaaatgatgaatgtttccgggaatgtaaagtcggt
tccaaggatatcacagatctagtgaagaaagctgttggagctgctgaaacagaagcaaaa
acagctaatgctccagctgaagctgttaaagcagctggtgatgctgctgcagaagtagtc
aagagtgctgcttttgaggaatttaagaagtcaaatgatgaggaggctgcagttttggct
gcttcaaaagctgcatctacagtcattgatgctgctattgctgttgaagtttcaaggagt
gctatttctgaaggtgaatcacaagatataaaagcaacagcgcaagaagcaaatgaggat
gttgatgaattcttcattctggataatgactctcttgcaaagttgcgagagaagttctgc
atccagtgtcttattgttttgggagagtatgttgaagttcttggtcctgtgttgcacgaa
aaaggagtagacgtgtgtattgggctactgcaacgtaattccaagcatatagaggggtgc
aaactttcacttcttttgcctgatgttctgaagctgatctgtgctttggctgcacatcgg
aaatttgctgcagtatttgtggatcgtggcggcatgcaaaaattgcttgctgccccaaga
gctcctcagactttttgtggcctttcttcatgcttattcgctatagggtcaattcaggga
ataatggaacgtgtttgtactcttccttcaagcattatccatcaggtggttgagttggcg
cttcaacttcttgaatgtcctcaagatctagccagaaaaaattctgccttattttttgcg
gctgcatttgttttcagagctgtcgtagacgcttttgatgctcaggatggtttacagaaa
atgcttaatctcttgcaagatgctgcattagtgaggtctggagcttcttcgggggcatta
actgcttcagggtcattacggagtgacagattaccaccagaggtgctgactgcttctgaa
aagcagatagcatatcacacatgtgtcgcacttcgacagtacttcagagcacatcttctc
ttactggtggattcaattcgccctaataaaagtgttcgcagtgctggacgaaatatccca
agtgttagggctgcgtctaagcctcttgacattagtaatgaagctatggatgctgttttc
cgtttaatccagaaagatcggagacttggtcctgcagctgttagagcccgctggcctgta
gttgacaagtttttaaattgcaatgggcatattacaatgttggaattatgtcaggctcca
cctgttgagcgttatttgcgtgacttgcttcagtatgctcttggtgtacttcatatcgtc
actttagtaccttacagccgtaaacttatcgtaaatgcaacattaagcaatgatcgtgtg
ggtatagccgttatattggatgcagctaacagtgccggttatgtagaacctgagattgtt
gaagcagcattgaatgtgttagtttgtctcgtgtgtcctccaccttcaatcagcaataaa
ccatctgtatctacacaagcacagcaaaccaatgctgtccaatctgcaagtactcctggt
gtggagaccagagaccggaatgcagaccggaacgagaccagggacagaaatgcagagcgg
tttcttccagatcgagctgttaatatctccagtcagaatgaaaatagagaatctacttta
tcagaccgtggaagcacagcagttcctgccacatctgcggtcagtggcacttctcaaggg
cctgtgtctacaatgacatcaggattagttggagaccgaagaatatcactaggtgctgga
gctggttgtgctggccttgctgctcaacttgaacaatgttaccgtcaagcgagagaagct
gttcgggcaaacaatggtattaaggtcctcctgcagctcctccagccacggatagttact
cctccagctgcaattgactgtcttcgtgctcttgcttgccgagtacttcttggtttggca
agagatgatacaattgcacatatattaacaaaacttcaggttgggaaaaagttgtcagaa
ctcatacgagattcaggaaatcagactcctggcagtgaacagaaccggtggcaagcagaa
cttgcacaggtggctattgagcttattggggttgtaactaattcgggccgtgcaagttct
ctggctgctacagatgctgcgaccccaacattaaggcgtatagagagagctgctatagct
gctgctactccgatcacatatcatgcaagggaacttttactcctcatccatgaacaccta
caagcttctggtcttacagacactgcaactatgcttcttaaggaggctcagttgacacct
ttgccatctttagctgctccatcatctctggcacatcaaacatcagggcaggagacatca
tcagttcaaattcagtggccatctggtcgtgcacctagaggatttttgtcagctaaaccg
aaacttccgtcattggatgaggatggcggattgaaatctgagtcaattgtctgttcttca
agaaggaagccgttggccttttcatcttcgcgtagtgtgtcctcaaaatctcttcctgtt
gatgtctctccatctacatcaggctgcaaattcagtaattcgaaaaagtgtgccacacct
gtagctacatcagaaactccatcactatctacagtgaaatctggtggagatccagacatc
atgtttaaaactcccattgtattgccaatgaaacgcaagttaactgatctgaaggaaggt
ggatcagtagcatcagttaagcgactcaatactggtgaacatacagtcaggtctccggtt
tgtgtcactccaaattcgttccgtagaagtggtctaccatcagatcctaatgtgccttca
acaccaaattctactttgagagagatccataatcgacctggctcaagtgcttttccaact
gaaggtgatgatactcctatggtgtcgtcttctcaacatggtcttctgagtgactcacaa
ccctcaaatgcggagcggttgaccttggactctgtggttgttcagtacttgaagcaccag
catcgccaatgtcctgctcccatcacaacgttacctcctctttcgctcttgcaccctcac
gtctgtcctgaaccaaaacgaagccttgatgcaccatcaaatgtgacatcacggcttagt
actcgtgattttagaagtttgaatggtgggacacacggaaagcgtaaggatcgacaattc
gtctacagtagatttagaccgtggcgcacttgccgggatgatgctggtgtcttattgaca
tgtgtctcttttatgggagattcttcgcaaattgctgctggcactcattctggagagctg
aaaatatttgactctaacagcagcagtatcttagaaagcttcaccagtcaccaggcacct
ttaacacttctacagtcctacctttctgttgagacacagcttctcctgtcttcaagtgct
cacgatgtgcggttatgggatgcaacttctgtttcagctgggcctaagcattcatttgaa
ggctgtaaagctgctcgatttagcaatttcggtacaacatttgctgcattgtctgcagag
caatctcggcgcgagattcttctgtatgacactcaaacctgccaaatggaactgaaactt
acagacacatccaatattccttcaggccgaggacatatgtattcccttgcacattttagc
ccatcagacaatatgcttctctggaatggtgtcttatgggatactcgtggttctggccca
attcatcgttttgatcaatttaccgactatggtggcgggggctttcatcctgctggcaat
gaggtcatcataaattctgaggtatgggatttgcggaacttcaggcttctgcgaagtgta
ccgtctttggaccagactgtaataacatttaatgcaagtggtgatgtgatatatgccatc
ttgagaagaaatcttgaggatgtcatgtctgcattccagacacgtcgtgttaaacatcct
ctctttgctgctttccgtacggtggatgctgttaactactctgacattgcaaccattcca
gtagaccgttgtgtacttgactttgcgacggagccaactgattcatttgttgggctggtc
acaatggatgaccaagatgagatgtactcttctgctagggtgtatgaaattggtcggagg
aggccaactgaggatgattcagaccctgacgatgctgaaagtgaagatgaggatgaagac
gatgatgatgacattgacgatgaagtgatccttggaacggatcttgatggggacggtgaa
agcgatgcagatgatttgagcaatgatgatgatagtgtgagtgagcttgatgacgaagaa
gatgaagacggtgacttcattgtagatggtgtggactttggtggtggaggtatattggag
attgtgacagatggtgaagatgaagatgacagtgagcttgttgaatcctttagtagtggg
gatgatgatgatgatgatctgttgtag
DBGET
integrated database retrieval system
