Solanum verrucosum: 125827379
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Entry
125827379 CDS
T11474
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
sver Solanum verrucosum
Pathway
sver03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125827379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125827379
04121 Ubiquitin system [BR:
sver04121
]
125827379
03036 Chromosome and associated proteins [BR:
sver03036
]
125827379
03400 DNA repair and recombination proteins [BR:
sver03400
]
125827379
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
125827379
Ubiquitin system [BR:
sver04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
125827379
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
125827379
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
125827379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_2
zf-HC5HC2H
BRCT
zf-C3HC4_2
zf-C3HC4
zf-HC5HC2H_2
zf-RING_UBOX
zf-RING_2
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
RTT107_BRCT_5
zf-RING_5
PHD_NSD
zf-RING_10
PTCB-BRCT
zf-rbx1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
125827379
NCBI-ProteinID:
XP_049362655
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MADISHLERMGRELKCPICLSLLNSAVSLTCNHVFCNLCIQTGMKSGSNCPVCKVPFHRR
EIRPALHMDNLVSIYKNMEIASGVNMFLTQSNPSSKLPGEDTQSNDEKNCGFQETPKTVT
EAPATGNQKRKRGKGSKKSSGCNKKISGSNLIRPSFLTKKRVQVPQYPPSETPPPTKLVG
GNGKSITDEVQKPLVIERDRSMLNEKGEPVLSPFFWLREENIERSSQQTDGDIIMDTPPA
VPSFSDMKDLDDEVHCEMSPKSGPYDAASGADLFDSEMFDWTQRACSPELCSSPFKMKLK
DTIDSAGAQEKTQARSVEESGINASATENRTAVENEKGTDKGQLSSPALFPPENKTTSRK
DVVCKSSKSKALRIREKKQGKSIIGEVSEVHNASPKAAEKTMKNNQDNANAFISNKKDLT
NKKKGRSSRNVTGSVVEDISTLCGAKRLRKGNNSKSFNLSTLVNQEKHSEGSVETLDLKT
HNKLRKGSLSEQNKNCFGPKGGQKTAACNIPQTQDETLPFESANRLIPMDNRKPTPSTKL
KKCELGSGNKLHGKKKVKFSDDGQLADKDNIMLQKIQKRVHSSLETEKSVLNLNDSVLQK
CEASQNQIQCAFCRSAEESEVSGVMVSYLNGNPVKEDVNGAPGVIHVHKYCAEWAPNVYF
GDDDVVNLESELKRSRRITCFFCGVKGAALGCYETSCRKSFHVPCAKLTPECRWDSDNFV
MLCPLHANSKLPCEIPGKQTKIGDSIKRNSRIHQPKVSATPDNAATLQWKSQKKNKNLVL
CCSALTADEKELVSTLKRLSGVTVVKNWDLSVTHVIASTDEKGACRRTLKYLMGVLAGKW
IMSIDWIIASLEATEFIDEQQYEIKIDTHGIVDGPKLGRLRILNKQPKLFNGYKFFFMGD
FLPSYKSYLHDLVIAAGGIVLNRKPIAVDQEILSRGCSPPFVIYSHEQLDQCEGSEKISI
IVRRRSDAEVLASSTGAVAASNSWILNCIAGSRLLELE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcagatatttcgcatcttgaaagaatgggaagagagctcaaatgccccatctgcttg
agtctgttgaattctgctgtttcacttacatgtaatcatgtattttgcaatttatgtatt
cagactggtatgaaatctgggtccaattgtccggtgtgcaaagttccatttcatcgcaga
gaaatccgacctgctctccacatggataacttggtgagcatctataagaacatggaaatc
gcttcaggagtcaatatgtttctcactcaatccaatccttcatcaaaattgccaggggaa
gacactcaatctaatgacgaaaaaaattgtggattccaagagacacctaaaactgtaaca
gaagctccagcgacaggcaatcagaagagaaaaagagggaaaggttcaaaaaaatcttca
gggtgcaacaaaaaaatttccggatcaaatcttattagaccttcttttctgacaaagaag
agagtgcaggtgccacaatatccaccttcagagactccaccacctacaaagttagttggt
ggaaatggtaaatccatcaccgatgaagttcagaaaccattggtaattgagagagacagg
tctatgctaaatgaaaaaggagaacctgtactatctccattcttctggctgagagaagag
aatatagaaagatcaagtcagcaaacagatggggacattatcatggatacacctccagcc
gttccatccttcagcgatatgaaggacttggatgatgaggttcactgcgaaatgtctcca
aaaagtggaccctatgatgcagcaagtggagcagatctttttgacagtgagatgtttgac
tggacacaaagagcttgctcccctgaactttgttctagcccctttaagatgaagcttaag
gatactattgattctgctggagctcaggaaaagactcaagctcgctcagttgaggaaagt
ggcattaatgcatcagcaactgaaaacagaacagctgtggaaaatgaaaagggtactgat
aaaggacagctgagttcacccgctttatttcctcctgaaaataaaaccactagtagaaaa
gacgttgtttgcaagtctagcaagagtaaggcattgagaattagagagaagaaacaagga
aaaagcataattggagaagtatcagaagttcataatgcttcaccaaaagcagctgaaaaa
actatgaagaacaatcaggataatgccaatgcatttatctcgaataagaaggatttgaca
aacaagaaaaagggtagatcctctagaaatgtcactgggtcagtagtagaagacatttcc
actttatgtggtgctaaaagacttcgcaagggcaataactcgaagtccttcaacttgtct
actcttgtgaatcaggaaaaacacagtgaaggaagtgttgagacacttgacttgaagaca
cataataaactccgcaagggatcattaagtgaacaaaataaaaactgttttggaccaaaa
ggcggacaaaaaactgctgcatgtaacattccacaaactcaagatgaaactttgcctttc
gaatcagcaaatagattgattcccatggataacaggaaacctactcctagtacaaaactg
aagaaatgtgagctcggtagtggcaacaagcttcatgggaagaaaaaagtgaagttttct
gacgatgggcagcttgctgacaaggataatattatgcttcaaaagattcagaagagagtg
cacagttcattggaaacagagaaatctgttttgaacttgaatgattcagttttgcagaag
tgtgaggcaagccaaaaccaaatacagtgtgctttctgccgttcagcagaggaatctgag
gtttcaggagtcatggtaagctaccttaatggaaaccctgtcaaagaagatgtcaatgga
gcaccaggtgttatacatgttcacaaatattgtgcagaatgggcccctaatgtatatttt
ggagacgatgatgtggtcaaccttgaatctgaactgaagaggagtcgaaggatcacttgt
tttttctgtggagtaaagggggcagctcttggatgttatgagacgagttgtcgcaaaagc
tttcatgttccttgtgccaaattgacaccagagtgtagatgggattctgacaactttgtt
atgttatgccctttgcatgctaactctaagttgccatgtgagatcccaggaaaacagaca
aagattggagatagtattaaaagaaattctcgtatccaccaacccaaagtctcagcaaca
cctgataatgctgctactttgcagtggaagtctcagaagaagaataagaacttagtgctc
tgttgttcagctctaaccgctgatgaaaaagagcttgtttctacattaaagaggttgtct
ggagtgacagtagtcaagaactgggacctaagtgtcacccatgtcattgcttctacagat
gagaaaggagcatgccgaagaactctcaaatatttgatgggtgtcttggctgggaaatgg
ataatgagcatcgactggattattgctagcttggaagccacagaatttatcgatgagcaa
caatatgagattaaaatagatactcatggcattgtggatgggcctaagcttggaagattg
aggattttaaacaagcaaccaaaacttttcaatggatacaagttcttttttatgggtgac
tttttaccttcatacaagagctacctacatgaccttgttattgctgctggaggaattgtc
cttaacaggaagcctatagcagtggatcaggaaattctttcgcgcggatgctctccaccg
tttgtaatttatagtcacgaacaacttgatcagtgtgaaggaagtgaaaaaatttcaatt
atagtgcgcagaagatctgatgcagaagttttggctagttcaactggagcggtagctgcc
agcaactcatggattctaaactgcattgctggctctaggttgttggagctagaatag
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integrated database retrieval system
