Solanum verrucosum: 125827401
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Entry
125827401 CDS
T11474
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
sver Solanum verrucosum
Pathway
sver03013
Nucleocytoplasmic transport
sver03015
mRNA surveillance pathway
sver03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125827401
09122 Translation
03013 Nucleocytoplasmic transport
125827401
03015 mRNA surveillance pathway
125827401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125827401
03041 Spliceosome [BR:
sver03041
]
125827401
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
125827401
TREX complex
125827401
Spliceosome [BR:
sver03041
]
Complex C
Other components
EJC/TREX
125827401
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125827401
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_3
YHR127W_C
RRM_10
Motif
Other DBs
NCBI-GeneID:
125827401
NCBI-ProteinID:
XP_049362673
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MSNLDVSLDDLIKRNKSSTSRNPRPRTTGSGSGSGPGFDSGPGPRRRFPNRASNRPAPYS
VHAPESTWDHDMFAEHAPSSARGPGVSGIETGIKLLISNLDYGVSNEDIKELFSEAGDIK
RYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKRYNNVQLDGKPMKIEFAGTNIAPPALPPI
RNRLYGNPNPAPRSQQRGGGFRRPRGGGRGSMRKDGGRGRGRGENVSAEDLDAELEKYHA
EAMQTN
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctggatgtatctctcgatgatttgatcaaaaggaacaaaagttccactagt
cggaaccctagacccagaacaaccggatctggatccggatccgggcccggattcgactct
ggtccaggtccaaggcgtcgcttccctaaccgtgcctccaaccggccggcgccatattct
gttcatgcaccggagtctacatgggaccatgatatgtttgcggagcatgccccgtcgtct
gcccggggacctggggtgtccgggattgagaccggtattaagctcctcatttccaatttg
gattatggggtttcaaatgaagatatcaaggagcttttctcagaagctggtgatataaag
cgttactcaattcattatgacaagagcggaagatcaaagggaactgcggaagtaatcttt
tcacgtcgaagggatgcagaggcagccattaagagatacaacaatgttcagctagatggg
aagcccatgaaaattgagtttgctggaacaaatattgctcctccagctcttcctcccatc
agaaatcgtttatatggaaatccaaatcctgctccaagaagtcaacaaagaggtggtgga
tttagacgtcctcgaggtggtggtagaggaagcatgagaaaggatggtggaaggggcaga
ggtcgtggtgagaacgtttctgcagaagatcttgatgctgaattggagaagtatcatgca
gaagccatgcagacaaactaa
DBGET
integrated database retrieval system