Solanum verrucosum: 125827931
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Entry
125827931 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125827931 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sver03016
]
125827931
Enzymes [BR:
sver01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
125827931
Transfer RNA biogenesis [BR:
sver03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
125827931
Prokaryotic type
125827931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
125827931
NCBI-ProteinID:
XP_049363221
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MEKEPVPSSITEEPQPKKLKMSTTTTSDDEEYAAGAGAGAGDGSAPERKPRYKRRKVAIF
FAYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRKYEWARSARTDKGVSAV
GQVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSAKKFCDKRRYVYLVPVFALD
PYAHRDRESVLASLGSEKELVKCLNCPERGRKVVGVMGRRVFDPITRSVIIVDAPVVNAN
DPTTDTNMVIENEASLSERVEERNDEVEGSNENAKMEEQVEESVFCYGEKEKERFNRILK
YYEGTHNFHNFTTRTKADDPAAKRYIISFNANTVVNVDGIDFVKCEVVGQSFMLHQIRKM
IGLAVAIMRNCAPESLIVTAFRRDVNINVPMAPEVGLYLDECFFTSYNSKWKDTHEEVSL
KAYLEEAEEFKMKYIYSHIASTEQKEGTMAVWLHSLNHRNYPDLRAVDIVKPAGGGPEVV
ETAVEAGLGAVNNGESTDNVNSAGAGPDVIETVVEAGLGAVNNGESTDSVNSAGAGTEVV
KTVVEAGLVAVNNGESTGNVNSAGDGSEVVKTVVEADLVALNNGESTDAKNGEAGHDADL
VNS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaaccagttccttcatcaattaccgaagaaccacaacccaaaaagctgaaa
atgtccaccaccactacttccgacgacgaagaatacgccgccggcgccggtgctggtgcc
ggagatggttctgctccggagaggaaacctagatacaagcgccggaaagtagcaatattc
tttgcttactgtggagtaggatatcagggtatgcagaagaatcctggagcaaaaacaatc
gaaggagatttagaagaagcactttatcaagcaggtggtgtgcctgaccatgataaatgt
caacccagaaagtacgagtgggctcgttctgctcgtactgataagggcgttagcgccgtc
ggtcaagttgtttcgggtcggttttacgtcgatccgcctggttttattgatcggcttaac
tccattctcgttcctcaaatccggatctttgggtttaaacgtgtaacgaatgcgtttagt
gctaagaagttttgtgataagcgtaggtatgtgtatttggttcctgtttttgctcttgat
ccatatgcacatcgtgatagagaaagcgtgttagctagtttaggatctgaaaaagagctt
gttaagtgtttaaattgtccagaaaggggtcgtaaagtcgttggagtaatgggtagacgt
gttttcgatccaataactcggtcagttattattgttgatgcaccagtagttaatgcaaat
gatccgactactgatacaaatatggtaattgaaaatgaagcttctttgagtgagagggtt
gaagaaaggaatgatgaagttgaaggaagcaatgaaaatgctaaaatggaagaacaggtg
gaagagagtgtgttttgctatggagagaaagaaaaagagagatttaacagaattttgaag
tactatgaaggaactcataattttcacaatttcacaactagaacaaaagctgatgaccct
gctgccaagcgatatatcatttcctttaatgcaaatactgtagttaatgttgatggcatt
gattttgtgaagtgtgaggttgttggtcagagcttcatgcttcatcaaatccgtaaaatg
attggtcttgctgtagctatcatgagaaattgtgctcctgaatcgttaattgtaactgcc
ttccgaagggatgtcaacatcaatgttcccatggcgcctgaggttggtttgtatttggac
gaatgttttttcacctcatataacagtaagtggaaggacactcatgaagaagtgtctctg
aaagcttatttagaggaggcagaagaattcaaaatgaagtatatctatagtcatattgca
tcgacagaacaaaaagaagggacaatggctgtgtggctgcattccctgaaccatcgtaat
taccctgatctgcgtgctgtggatattgttaaacctgctggtggtggtccggaagttgtt
gaaactgctgttgaggctggtttaggtgctgtcaacaatggtgagagcactgataatgtt
aattctgctggtgctggtccagatgttattgaaactgttgttgaggctggtttaggtgct
gtcaacaatggtgagagcaccgatagcgttaattctgctggtgctggtacagaagttgtt
aaaactgttgttgaggctggtttagttgctgtcaacaatggtgagagcactggtaatgtt
aattctgctggtgatggttcagaagttgttaaaactgttgttgaggctgatttagttgct
ctcaacaatggtgagagcaccgatgcaaagaatggtgaggcagggcacgatgctgatttg
gtcaactcatag
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