KEGG   Solanum verrucosum: 125828357
Entry
125828357         CDS       T11474                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
sver  Solanum verrucosum
Pathway
sver04136  Autophagy - other
sver04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:sver00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    125828357
   04136 Autophagy - other
    125828357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sver04131]
    125828357
Membrane trafficking [BR:sver04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    125828357
   mTORC2 complex
    125828357
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_EML_2 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DSE1_N Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_WDR41 ANAPC4_WD40 CFAP251_N Beta-prop_HPS5 ASA1 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_IFT140_1st WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_SPT8 PAC11 Beta-prop_IP5PC_F Beta-prop_WDR35_TULP_N DmsR_N
Other DBs
NCBI-GeneID: 125828357
NCBI-ProteinID: XP_049363627
LinkDB
Position
Unknown
AA seq 315 aa
MSQPSVVLATASYDHTIKFWEAKSARCYRTIQYPESQVNRLEITPDKRFLAAAGNPHIRL
FDINSNSPQPLRSFDSHTNNVMAVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGSLIVAA
NNRGTCYVWRLLRGTETMTNFEPLHKLQAHDGYILKCLLSPELCEPNRYLATASSDHTVK
IWNVDGFTLEKTLIGHERWVWDCVFSVDGAFLITASSDTTARLWSTSTGKDIKVYQGHHK
ATVCCALHDGPEPSS
NT seq 948 nt   +upstreamnt  +downstreamnt
atgagtcaaccatcagtggtgctagcaacggctagctatgatcacactataaaattttgg
gaggccaagagtgcccgctgctatcgaactattcaatacccagagtcacaagttaatcgt
cttgaaattactccggataaacgcttcttggctgctgctggaaatcctcacattcgatta
ttcgacatcaactcgaacagtcctcagccgctgaggagctttgattcacacactaataat
gtgatggcagtaggatttcagtgtgatggaaactggatgtattctggatctgaagatggc
actgtaaagatttgggatttgagggccccaggttgtcagagggaatatgaaagtcgggca
gctgtgaacactgtagttttgcaccctaatcagactgagttgatatctggagaccaaaat
ggcaatatccgtgtatgggatttgagagcaaattcatgtagctgtgagttggtaccggag
gtggatacagctgttcgttctttgactgtaatgtgggatggaagcttaattgttgctgca
aacaatcgtggaacatgttatgtttggcgtttactacgtggcaccgagacaatgaccaac
tttgagcctctgcataagttacaggctcatgatggttatatcctcaaatgtcttctttcc
cctgaattatgcgaacctaacaggtatctggcgactgcatcttctgatcatactgtcaag
atttggaatgtggatggctttaccttggagaaaactctgataggacacgaacgctgggtt
tgggactgtgtattctctgtagatggtgcttttctcatcacagcatcttctgatacaaca
gcaagattatggtccacatctacaggcaaagatatcaaagtataccaagggcatcataaa
gcaacagtatgttgtgctctacatgacgggcctgaaccttctagctga

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