Solanum verrucosum: 125828606
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Entry
125828606 CDS
T11474
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
sver Solanum verrucosum
Pathway
sver03010
Ribosome
sver04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
125828606
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125828606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sver03011
]
125828606
04121 Ubiquitin system [BR:
sver04121
]
125828606
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sver04147
]
125828606
Ribosome [BR:
sver03011
]
Ribosomal proteins
Eukaryotes
Small subunit
125828606
Archaea
125828606
Ubiquitin system [BR:
sver04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
125828606
Exosome [BR:
sver04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125828606
Exosomal proteins of colorectal cancer cells
125828606
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Plexin_RBD
Dsc3_N
DUF2604
UBL_UBAC1
TBK1_ULD
OTU1_UBXL
Fer2_3
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
125828606
NCBI-ProteinID:
XP_049363875
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctaacgggcaagactattaccttagaggtagagtcatcg
gacaccattgacaatgttaaggctaagattcaggacaaggaaggcattccaccagaccag
cagaggttgattttcgcgggaaagcagctcgaggatggccgaacgctagctgactacaac
atccagaaggagtccaccctccaccttgtccttcgtctccgtggtggtgccaagaagcgt
aagaagaagacttacactaagcctaagaagatcaagcacaagaagaagaaggttaagctc
gctgtcctccagttttacaaggttgatgattctggcaaggttcagagacttcgtaaggag
tgcccaaacgctgagtgtggcgctggaaccttcatggctaaccattttgataggcactat
tgtggtaaatgtgggcttacctatgtttaccagaaggctggtggtgattag
DBGET
integrated database retrieval system
