KEGG   Solanum verrucosum: 125829085
Entry
125829085         CDS       T11474                                 
Name
(RefSeq) DNA-repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
sver  Solanum verrucosum
Pathway
sver03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125829085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sver03400]
    125829085
DNA repair and recombination proteins [BR:sver03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     125829085
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 DUF6772
Other DBs
NCBI-GeneID: 125829085
NCBI-ProteinID: XP_049364319
LinkDB
Position
Unknown
AA seq 388 aa
MSGSNDGDKNGRKRNLPSWMSSKPGSSGSGQSKSNDEGETTETAEQGKGRRKTNHGKTLP
DEAENEAHFSNFSKLMEGVVFVLSGFVNPERGTLRSQALEMGAKYQPDWNSESTLLICAF
SNTPKFRQVEADNGTIVSKEWITECYKQRKLVEIETYLMHAGKPWKRQSVSHESSQDQKP
STSRKSQTRGEKNSPFKTTTAPSAAPSSEEVHSDNVKDGFSPYKVKKWAIDDLNRTISWL
ENQDERPEPHEMKKIAAEGILTCLQDAIDSLNQGQDMRQITEQWECIPRAVEELAKFDGS
CVGSATMHKDLCKQAATCKQIYELEYRNREDDELSKRKEQQTRVSGKAGGAAKDAAAYDS
DDTVEMTEEEINHAYNAVASTVRNTKRV
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgtctgggtcaaacgacggtgacaagaatgggaggaaacgtaatcttccttcatggatg
agttcaaaacccggttcaagtggttcgggtcagagtaaatcaaatgatgaaggtgagacg
acggagacagctgagcaagggaaaggtagacgcaaaaccaaccatggcaaaacacttccc
gacgaagctgagaacgaagcacatttttcaaatttctcaaaacttatggaaggggttgta
tttgtcctatcaggttttgtcaatcccgagcgtggtacattaaggtcccaggctttagaa
atgggagccaagtatcaacctgattggaactcggaatccacactcttgatctgtgcattt
tccaatacaccaaagtttcgtcaagttgaagcagataatggaacaattgtatcgaaggag
tggataacagagtgttacaaacaacgaaaacttgttgaaattgaaacttatcttatgcat
gctggcaagccatggaaacgtcaaagtgtctctcatgaatccagccaagatcaaaaacca
tcaacatcaagaaaatctcaaacaagaggagagaaaaattcaccttttaagacaactact
gctccttcagctgctccttcatctgaggaggtacattctgataatgtaaaagatggcttc
tctccatataaagtgaaaaaatgggctatagatgatcttaaccggacgatttcatggctg
gagaatcaagatgaaaggccagagccccatgagatgaagaaaatagctgctgagggaatt
ctaacctgtttacaggatgccatagattctcttaatcaagggcaggatatgcgtcaaata
actgaacagtgggaatgcatccctcgtgctgttgaggagctggcaaagtttgatggtagt
tgtgttggttcagctacaatgcacaaggatctttgcaaacaagctgcgacctgtaaacaa
atttatgagctggagtacagaaatagagaagacgatgaactttcgaagaggaaagagcag
cagactcgtgtaagtggaaaggctggtggcgctgccaaagatgctgctgcatatgacagt
gatgatactgttgagatgacagaagaggaaattaaccatgcttataatgccgtagcatct
acggttcgaaacactaagagagtgtaa

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