Solanum verrucosum: 125829328
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Entry
125829328 CDS
T11474
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sver Solanum verrucosum
Pathway
sver03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125829328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sver03400
]
125829328
Enzymes [BR:
sver01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
125829328
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
125829328
Prokaryotic type
125829328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PUB_1
Motif
Other DBs
NCBI-GeneID:
125829328
NCBI-ProteinID:
XP_049364523
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MHRGFPPENRVSWVILGSISSLLITSTLTKMASSSSKTLMDLSKQPAAKRLKQVSSTDNF
TSSALSSSSSRKDCDEDPKDVVSFTPEQKSRMEFNRSLAKAKRNLKLCSDKISKLNANGE
GGGYVKLRELLIEETWVEALPGEFEKPYAGNLCKFVEKEISGGVPIYPPLHLIFNALNTT
SFDRIKAVIIGQDPYHGPGQAMGLSFSVPKGVKVPSSLMNIYKELKEDLGCSIPLHGNLE
QWAVQGVLLLNAVLTVRHHQANSHANKGWEQFTDAIIKTISQKKEGVVFILWGNYAQAKA
RLVDETKHHILKSAHPSGLSANRGFFGCRHFSQTNQLLEKMGMPPIEWQL
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgtggtttcccgccagagaatagagtgagttgggtgattttgggttccatttcc
tctctgctcattactagtactttgactaaaatggcgtcttcttcatccaaaaccctaatg
gatctatcgaagcaaccagcagcaaagcgtctaaaacaggtgtcttctaccgataacttc
acttctagcgccttgtcatcttcatcttcgcgtaaagactgtgacgaagaccccaaagac
gtagtatcctttacgccggagcaaaagtcgagaatggagttcaacagatcactcgcaaag
gccaaaagaaacctcaaactatgttctgataaaatctccaaattaaacgcaaacggtgaa
gggggcggatatgtgaagttacgggaactgttgattgaggagacatgggtggaagcattg
ccaggggaatttgagaagccctatgcagggaacttgtgcaaatttgtggaaaaggaaatt
agtggtggtgtcccaatttatcctccactacatctgatttttaatgctcttaacactact
tcatttgacaggataaaggctgtcattattggacaggatccatatcatggaccaggtcag
gcaatgggcctctctttctcggtgcctaagggtgtgaaagtcccttctagtctgatgaat
atatataaagaacttaaagaagatttgggctgttcaataccacttcatggaaatctggaa
caatgggctgtgcagggcgttctgcttctcaatgctgttctaacagtcaggcatcatcag
gcaaattcacatgcaaataaaggctgggagcaatttacagatgctatcatcaaaacaatt
tctcaaaagaaagaaggagttgttttcattctgtggggaaactatgcccaagcaaaagcc
aggttagttgatgaaacaaagcaccatattctcaaatcagcacacccttctggattgtct
gcaaacagaggtttctttggatgccggcatttttcacagacaaaccaacttttggaaaag
atgggaatgcctcccattgaatggcaactataa
DBGET
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