Solanum verrucosum: 125830185
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Entry
125830185 CDS
T11474
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sver Solanum verrucosum
Pathway
sver04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125830185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125830185
Membrane trafficking [BR:
sver04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125830185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
TraH
Motif
Other DBs
NCBI-GeneID:
125830185
NCBI-ProteinID:
XP_049365338
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MTPNGVEDEEKFLASGIAGIQQNAFHMHRALDSNNLKDALKYSAQMLSELRTSRLSPHKY
YELYMRAFDELRKLEMFFKEETKRGCSIVELYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSKDKLPDIGSEYEGDADTIVDAVEFVL
QNFTEMNKLWVRMQHQGPAQEKKKREKERSELRDLVGKNLHVLGQIEGIDLEMYKETVLP
RILEQVVNCKDEIAQGYLMDCIIQVFPDEYHLQTLETLLGACPQLQPSVDIKMVLARLME
RLSNYAALSTDVLPEFFQVEAFAKLNSAIGKVIEAQEDMPIAGVVTLYSSLLTFTLHVHP
DRLDYVDQILGACVKKFSGKGKLKDSIATKQIVALLSAPLEKYKDIDTALKLSNYPHVME
HLDDATSKEMANVLVQTILKNKTCISTDEKVEALFELMKGLIRDLDENLHDEFDEEDFKE
EQNSVSRLIQMLHNDDPEEMLKIICTVKKHIVTGGPKRLPFTVPPLIFNSLKLVRRLQNQ
DENAPEEETSAIPKKIFQILNQIIESLSSVPVPELALRLYLECAEAANDSDLEPVAYEFF
TQAYILYEEEISDSKAQVTAIQLIIGTLQRMHIFGVENRDTLTHKATGYSAKLLKKPDQC
KAVYSCSHLFWVDDQDSIKDGERVLLCLKRALRIANAAQQMSNATRGSSGSVLLFIEILN
KYLYFYEKGVTQITVASIQSLIELITTEMQSENKTADPAADALLASTLRYIQFQKDKGGA
VGEKYESIKS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacccctaacggagttgaagatgaagagaaatttctagcttctggaatcgccggcatt
caacaaaacgcctttcacatgcatcgcgctcttgactcaaataatctgaaagatgcactc
aaatattcagctcagatgctgtcggagctccgaacttcaaggctatcacctcacaaatac
tacgagctatatatgcgggcttttgatgaattgagaaagctagaaatgttcttcaaggag
gagacaaagcggggttgctcaattgttgagttgtatgaactcgtgcagcacgctggcaac
attttgcctagactgtatctactttgcacagtggggtctgtgtacatcaaatccaaggag
gctcccgccaaggatatccttaaagacctggttgaaatgtgccgtggtatacaacatcct
ttacgtggactctttctgaggagttacctttcccaagttagcaaggataaattgcctgat
ataggttctgagtatgaaggagatgcggatactattgtggatgctgtagagtttgtactc
caaaatttcacggaaatgaacaaactctgggttagaatgcaacatcagggacctgctcag
gaaaagaagaaacgcgaaaaggaaaggagcgagcttcgtgatctcgtcgggaagaatctg
catgttctcggtcaaattgagggtattgaccttgagatgtacaaagagacggtgcttcca
agaattttagagcaggttgtcaactgtaaagatgagattgctcagggctatttgatggat
tgcataattcaagtcttccctgatgaatatcacttacaaactcttgaaaccttattgggt
gcttgtccccagcttcagccatctgttgatatcaaaatggtgcttgctcggctgatggaa
aggctctcgaactatgctgctttaagtacagatgttttacctgagttttttcaagtggaa
gcttttgcgaaactaaatagtgccatagggaaggtgattgaagcccaagaagacatgcct
atagctggagttgtgactttatattcatctcttttaacttttactcttcatgtccaccct
gatcgtcttgattatgtggatcagattttgggtgcatgtgttaagaagttttctggtaaa
ggaaagctcaaagacagtatagcaacaaaacagattgtggcccttctaagtgctccactg
gagaagtataaggatattgatactgcattaaagctttcaaattatcctcatgttatggag
caccttgatgatgcaactagcaaagagatggctaatgttttagttcaaactattctgaaa
aataaaacttgcatctcaacagatgaaaaggttgaggctctttttgaattaatgaaagga
cttatcagagatttggatgagaatcttcatgatgagtttgatgaagaagatttcaaggaa
gagcagaactctgtttcacggcttattcaaatgcttcacaatgacgaccctgaggagatg
ctgaagataatttgcactgtgaagaagcatattgtgacaggaggaccaaagaggcttccc
tttacagttcctcccctcatttttaattctcttaagttggtaaggcgactgcaaaaccaa
gatgaaaatgctccagaggaagaaacatctgctatacctaagaaaatttttcagatttta
aatcagataattgagtctctctcaagtgttccagtacctgaactagcactaaggttgtac
ctagagtgtgctgaggctgccaatgactctgacctagagcctgttgcctacgaattcttc
acccaagcttatatactatacgaagaagaaatttcggactctaaagcacaggtgaccgca
atacaattaataataggtactcttcagagaatgcacatctttggtgttgagaacagggac
acgctaacgcacaaggctacagggtactctgcaaaactcctgaagaagcctgatcagtgc
aaagctgtctactcttgttcacatcttttctgggttgatgaccaggacagcatcaaggat
ggagagagggttttgctttgtttaaaacgagccttaaggattgcaaatgctgctcaacaa
atgtcgaatgcaacccgaggcagcagtggatctgtcttgctctttatagaaattctaaat
aagtatttatatttctatgagaaaggggtcacacagatcactgttgcatccatccagagc
ctaatcgagctaataacaactgaaatgcaaagtgaaaataaaaccgctgatcctgctgca
gacgctttgctcgcaagcacattgcgctatatccagttccagaaggataaaggtggtgca
gttggtgagaaatatgaatccataaagtcttaa
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