Solanum verrucosum: 125830760
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Entry
125830760 CDS
T11474
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125830760
Enzymes [BR:
sver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125830760
Spliceosome [BR:
sver03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
125830760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
nSTAND_NTPase5
AAA_16
Motif
Other DBs
NCBI-GeneID:
125830760
NCBI-ProteinID:
XP_049365888
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MTTLPILFPSLSPSNSITSRSPFPLLHIQTLRFCSVKSIQKNPFTSTSRIFYKFPSSIFP
AESQDEDEDEDEDEDEEDDDDEEAAEEYNDVYADVSDGGEDSEDELESSVSSEIFNIEES
RRQRVEKLRNEVREFGDGIIDVNELASIYSFRIDKFQRLSIQAFLRGSSVVVSAPTSSGK
TLIAEAAAVATVARGRRLFYTTPLKALSNQKFREFCETFGESNVGLLTGDSAVNRDAQIL
IMTTEILRNMLYQSVGIASSDGGLLHVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQL
ICLSATVANPDELAGWIGQIHGRTELVTSTKRPVPLTWHFSTKTALLPLLDDKGTSMNRK
LSLNYLQYDESGGELYREEGSKRRKSIRRENAVRPLSKNDISNIRRSQVPQIIDTLWHLK
ARDMLPAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDAVRVSAVKG
LRRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDS
GRIQLSSNELFQMAGRAGRRGIDEKGHVVLVQTPYEGPEECCKVLFSGLQPLVSQFTASY
GMVLNLVAGAKVTRRSTGLDEIKVTRAGRTLEEARKLIEQSFGNYVGSNVMLAAKEELAR
IEKEIETLTSEISEEAIARKSQKLLTQSAYQEIAELEEELRAEKRLRTELRRKMELERVS
SLKPLLKEIGDGHLPFMSLHYTDSDGVQHLVAAVYLGKVDTLNTEKLKSMVWDNAFALKT
AVENFELGDNGGEDVKPSYHVALGSDNSWYLFTEKWIRTVYRTGFPNAALTLADALPREI
MAELLDKADMQWQKLAVSELGGLWCMEGSLETWSWSLNVPVLSSLSEDDEVLQLSQAYND
AVECYKSQRNKVSRGKKRIARTEGFKQYQKIIDSAKFTEEKIRRLKVRSKRLIGRIEQIE
PTGWKEFLQVSNVIHESRALDINTHVIFPLGETAAAIRGENELWLAMVLRNKLLLNLKPA
QLAAVLGSLVSEGIRLRPWKNNSFVYEPSTTVLNIIDLLEEQKSSLLELQEKHGVNIPCC
LDSQFTGMVEAWASGLTWKEIMMDCAMDEGDLARLLRRTIDLLAQVPKLPDIDPLLQINA
KSASNVMDRPPISELAG
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaccacactccctatcctcttcccttcactttctccttcaaactccataaccagtcgc
tctccatttccacttcttcacatacaaaccctacgattctgctccgtcaagtcaatccag
aagaatccgttcacttctacatctagaatcttctacaaatttccgagctcaatttttccg
gcggagtctcaagatgaagatgaagatgaagatgaagacgaagatgaagaagatgatgat
gatgaagaagcagcggaagagtacaacgacgtttatgcggatgtttcagatggaggcgaa
gacagcgaagatgaactggaaagttccgttagtagtgaaatatttaacattgaggaatcg
agaagacagagagttgagaagctgaggaatgaagttagagagtttggtgatggaattatt
gatgtgaatgaacttgcttctatttactcttttcgaattgacaaatttcagcgattgtcg
attcaagcttttttgagaggttcatccgttgtggtgtctgcgcctacaagtagcggcaaa
actttgattgctgaagctgctgcagttgctacagtagctagaggaaggagactattctat
actactcctctaaaggcgttatctaatcagaaatttcgagaattttgtgagacatttggt
gaaagtaatgtggggcttctcactggagattcagctgttaatagagatgctcagatttta
attatgacaactgagattttgcgcaatatgctgtaccagagcgtagggattgcttcctca
gatggtggtcttcttcatgttgatgtaattgttttggatgaagttcactatttaagtgac
atatctcggggtactgtttgggaagaaatagttatttattgcccaaaggaagttcaactt
atatgtctttcagcgacagttgctaatccagatgagttggctggatggattggtcagatt
catggtaggacggagttggtaacatcaaccaagcgtccagttccattgacttggcacttc
tccacaaagacagctctattacctcttcttgatgacaaaggaacaagcatgaatagaaaa
ctttcactcaactacttacagtatgatgaatccggcggtgaactatacagggaggaggga
tctaaaagaagaaaatcaataagacgtgaaaatgctgttcgtcccctttcaaagaatgat
ataagtaatattcgacgctcacaggtacctcaaattatagacacactgtggcatctaaag
gcaagggatatgcttccagcagtttggttcatctttagcaggaaaggatgtgatgcagct
gtccaatatcttgaagactgccggttactggatgagtgtgaaacgagtgaagttgaactg
gcactcaagaggttccgtattcaataccctgatgctgtgcgtgtgtctgcagtgaaaggc
ctccgccgaggagtggctgcacatcatgctggctgtctccccctttggaaatcattcatt
gaagagttatttcagcgaggtctagttaaggttgtctttgctaccgaaacacttgctgct
ggcatcaatatgcctgctagaacagctgtcatttcatctctcagcaaaaggggggatagt
ggacgaatccagttaagctcaaatgaattattccaaatggctgggcgtgctggtcgtaga
ggtattgatgaaaagggtcacgtggttcttgttcagactccttatgaagggcctgaggag
tgctgcaaagttcttttttctgggcttcaacctcttgtttcacaatttaccgcctcgtat
ggaatggtgcttaatcttgtagcgggggccaaagttacccgtagatcaactgggttagat
gagataaaagtcacacgagcaggacggactttggaagaagcaaggaagttaattgaacag
agttttggtaattatgttggaagcaatgtcatgcttgctgcaaaagaggagcttgctaga
atagaaaaggaaatagagacacttacttcagaaatcagtgaggaagcgattgctagaaag
agccagaagctcttaacgcagtcagcatatcaggagattgctgaactcgaggaagaatta
agagctgaaaagcgtcttcgaactgaactccgaagaaaaatggagctggaaagagtgtcc
tcgttgaaacctttgttaaaggagataggagatggacaccttccattcatgtctttgcac
tacaccgacagtgacggggtacaacatttagttgctgctgtttatctggggaaggttgat
actttgaatactgaaaagcttaaaagtatggtgtgggacaatgcctttgcattaaagaca
gcagtggaaaattttgaacttggtgataatggaggtgaagatgttaaaccgtcttatcat
gtggctcttggttcagataactcttggtatcttttcacagagaagtggattagaacggtt
tacagaacaggctttccaaatgctgccttaactcttgccgacgccttacctcgtgaaatt
atggccgagcttcttgataaggcagatatgcagtggcagaagttagctgtgtctgaactt
ggaggtctatggtgtatggaaggttctttggagacatggtcttggagtttaaatgttcca
gtcttgagtagtctatctgaagatgatgaggtcttgcaattatctcaagcatacaatgat
gcagtagaatgctacaagagccaaaggaataaggtctctcgtgggaaaaaaaggatagct
cgtacagagggctttaaacagtatcagaagataattgactcagctaagttcactgaggaa
aagattcgccggttgaaggttaggtcgaagcgtttgattggtcgtatagagcagattgag
ccaactggttggaaggaatttctgcaggtcagcaatgttatacatgaaagtagagcattg
gatatcaatacacatgtcattttccccctaggtgaaactgcagctgcaattcgaggagaa
aatgaactttggcttgcaatggttcttcgaaataaattgttgctgaacctaaaacctgca
cagcttgctgctgttcttggtagtctagtttctgaaggcattaggcttcggccctggaaa
aataacagttttgtttatgagccctctaccactgtcttgaatatcattgacttactggaa
gaacaaaaaagctcacttctagagcttcaggaaaagcatggagtaaatattccttgctgt
ttggatagccaattcactggcatggttgaagcctgggcttctggtcttacatggaaagag
attatgatggactgtgcaatggatgaaggagatttggcccgccttctacggagaacgatt
gatttgttagctcaggttcccaaattgcctgatatagatccactgctgcaaatcaatgcc
aagagtgcctctaatgtaatggaccggccaccaataagtgaattagcaggataa
DBGET
integrated database retrieval system
