Solanum verrucosum: 125830854
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Entry
125830854 CDS
T11474
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sver Solanum verrucosum
Pathway
sver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125830854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125830854
03110 Chaperones and folding catalysts [BR:
sver03110
]
125830854
03029 Mitochondrial biogenesis [BR:
sver03029
]
125830854
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sver04147
]
125830854
Enzymes [BR:
sver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125830854
Messenger RNA biogenesis [BR:
sver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125830854
Chaperones and folding catalysts [BR:
sver03110
]
Heat shock proteins
HSP60 / Chaperonin
125830854
Mitochondrial biogenesis [BR:
sver03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125830854
Exosome [BR:
sver04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125830854
Exosomal proteins of other body fluids (saliva and urine)
125830854
Exosomal proteins of breast cancer cells
125830854
Exosomal proteins of colorectal cancer cells
125830854
Exosomal proteins of bladder cancer cells
125830854
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125830854
NCBI-ProteinID:
XP_049365991
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKSRVARSSTQQVCSRLNWSRNYAAKDIKFGVEARGLMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDAAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGEIIARAMEQVGKEGVITIQDGKTLFNDLQVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKRQRPLLIVSEDVESEALATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGMNIENVELDMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSAIELSTSDYDKEKLQERLARLSGGVAVLKVGGASEVEV
SEKKDRVTDALNATKAAVEEGILPGGGVALLYASKELDSLPTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGSVVVGKLLEQDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLLTTTEAVIVELPKDEKAAPAMPGGGMDY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagcaaaacttgcttctaaatccagggttgcaagaagcagcacccaa
caggtttgtagtaggttgaattggagcagaaactatgctgctaaggatattaaatttgga
gttgaggctaggggactgatgcttcaaggagttgagcaacttgctgatgcagttaaagtc
actatgggtccaaagggtcgtaatgtggtgattgaacaaagttggggtgcacccaaggtg
acaaaagatggtgtcactgttgcaaaaagcatcgaattcaaggacaaaataaaaaatgtt
ggtgccagccttgtaaagcaagttgccaatgccactaatgatgctgctggtgatggtacc
acttgtgcaactgtcctcacccgagcaatatttgctgaagggtgcaagtctgtagctgct
ggtatgaatgcaatggatcttagacgaggtatcacgatggctgtcgatgctgtggtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttggtaca
atctctgcaaatggagaaagagaaataggtgagataattgctagggctatggagcaagta
ggaaaggaaggtgtcatcactattcaagatggaaagacactgtttaatgatttgcaagtt
gttgaggggatgaagttggacaggggctacatatccccatactttatcacaaatgagaag
aatcagaaatgtgagctggatgacccacttattcttattcacgagaaaaagatctcaagc
ataaatgctattgtgaaagtgttagaattggctttgaagagacaaaggcccctcctaatt
gtgtccgaagatgtggagagtgaagcactcgctacgcttattcttaacaagcttcgtgct
ggaatcaaggtttgcgccataaaagctccaggatttggtgaaaacaggaaggctaatttg
caagatcttgctgctttaactggaggccaggtcataacggaagaacttggaatgaacatt
gaaaatgtggagttggacatgctgggaaaatgcaaaaaggtgactatctccaaggatgac
accgttgttcttgatggtgcgggtgagaagaaggccatagaggagagatgtgaacagatt
agatcagcaattgaactgagcacgtctgattatgacaaggagaaattgcaagaaagacta
gctaggctttcggggggtgttgcagtattgaaggtaggaggagctagtgaagttgaggtt
agtgagaagaaagacagagttacagatgctttgaatgccacaaaagctgctgtagaggaa
ggaattcttccaggtggtggggttgcacttctttatgcatcaaaagaattggactcattg
ccaacagccaactttgatcagaagattggtgttcaaattattcagaacgctctgaagaca
ccagtatatacaattgcctctaatgctggggtggaaggatcagtagtggttggcaaattg
ttggagcaggataacccggatcttggatatgatgctgcaaaaggtgaatatgttgatatg
gttaaagcaggaatcattgatccattgaaagtaattaggacggccctggttgatgctgct
agtgtgtcatctttattaactacaactgaagctgttatcgttgagcttcccaaggatgag
aaggcagctccagctatgcctggtggtggtatggactactaa
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integrated database retrieval system
