Solanum verrucosum: 125832521
Help
Entry
125832521 CDS
T11474
Name
(RefSeq) heparanase-like protein 1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sver Solanum verrucosum
Pathway
sver00531
Glycosaminoglycan degradation
sver01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
125832521
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sver00536
]
125832521
Enzymes [BR:
sver01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
125832521
Glycosaminoglycan binding proteins [BR:
sver00536
]
Heparan sulfate / Heparin
Enzymes
125832521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_79n
DUF8196
Ig_TPPC8_C
Motif
Other DBs
NCBI-GeneID:
125832521
NCBI-ProteinID:
XP_049367645
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDFRTLLLIFLALCPALSAQTVKEIVLTIDASTKVAWTDANYIGATIDWWPKEKCNYNQC
PWGSASIINLDLTHPYLENAIRAFKGLRLRLGGSLQDQVIYGVGNLKSPCSSFTQQKDGL
FGFSKGCLPMQRWDELNNLFKKTGALVTFGLNALYGRQPTDRHAWVGNWDSSNALDFIKY
TVAKGYQINSWEFGNELSGSGIGASVDAAQYGKDVIQLHNLLNQVYQNTPVRPLLLAPGG
FYDPGWFGKLLQVSGRGTVNVLTHHIYNLGPGSDSKLVDKILNPEYLSRTEGTFSSLTQT
ILRNGPWASAWVGESGGAFNSGGPDVSNAFVDSFWYLDQLGMAAKHHTKVYCRQTLIGGN
YGLLDTDTFVPNPDYYSALLWNRLMGKVVLRVVNSAAPHLRTYAHCTKDRAGVTLLLINL
STQIQYKVNIHSTAETSLQVGEKKVHNKKSFARSIKESVSWVGTKSSDVTLSREEYHLTP
EGGNIKSRTMLLNGKLLRLTETGDIPSLSPVLANLNSPISIEPLSIKFIVFPNFNSPSCR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagaaccttgttgttaatctttttggcactatgccctgcactttcagcacaa
acagttaaagaaatagtacttacgattgatgcatctacgaaagttgcctggacagatgct
aattacattggtgctaccattgattggtggcctaaggagaagtgtaactacaatcaatgt
ccttggggttcagcatctattataaacctggatttaactcatccatatctggagaatgct
atacgagctttcaagggtttgagattacggcttggaggttctttacaagaccaagtaata
tatggcgtagggaacttgaaatctccttgcagttcattcacccagcagaaggatgggttg
tttggattctctaagggatgcttacctatgcagagatgggatgagctaaataaccttttc
aagaagacaggagcacttgtgacttttggcttgaatgcactgtatgggagacaaccgaca
gataggcacgcgtgggtaggaaattgggattccagcaatgcccttgatttcataaaatac
actgttgccaagggctaccagataaactcatgggaatttggaaatgaattgagtggtagc
gggattggtgcaagtgttgatgctgcacagtatggaaaagatgttatccagctgcacaat
ctcttaaaccaagtatatcagaacacccccgtacgtcctctactattagcaccaggagga
ttctatgatcctgggtggttcggcaagctccttcaggtttcagggcgtggcactgtcaat
gtcttgacacatcatatttataatcttggtccggggtccgatagcaagctagtggataaa
attttaaatcctgaatacctgagtagaacagaaggcacattcagcagtcttactcaaacc
attctaagaaatggtccttgggcttcagcttgggttggagaatctggtggagccttcaac
agtggaggtcctgatgtgtctaacgcctttgtagatagcttttggtacttagatcagctt
gggatggcagccaagcaccatactaaagtatactgcagacagacgcttataggtggaaat
tatgggctccttgataccgatacgtttgttccaaatcctgattattatagtgcacttctt
tggaatagactgatgggaaaagtagttcttcgtgttgtcaacagtgcagcaccacatttg
cgcacttatgcccattgtacaaaagatagagcaggtgtgactttacttctgataaattta
agcacccagattcagtacaaggtcaacatccactctactgcagaaaccagcttgcaagtt
ggtgagaaaaaggttcacaacaagaaatcattcgcgcgcagtattaaagaaagtgtgtca
tgggtaggaaccaagtcatcagatgttacattatcgcgagaagagtaccatctaacacca
gaaggtggcaacattaaaagcagaacaatgctcctcaacgggaaattattgcgactcaca
gaaacaggagacattccaagcttgtctccagtccttgcaaatcttaactctccaatatct
attgaaccattgtccatcaagttcattgttttccccaattttaattctcccagttgtaga
tag
DBGET
integrated database retrieval system
