Solanum verrucosum: 125833389
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Entry
125833389 CDS
T11474
Name
(RefSeq) uncharacterized protein LOC125833389
KO
K08518
syntaxin-binding protein 5
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125833389
Membrane trafficking [BR:
sver04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125833389
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125833389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_VPS8
WD40
WDR55
Lgl_C
Synaptobrevin
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_WDR5
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_IFT140_1st
NBCH_WD40
KNTC1_N
ABC_tran_Xtn
Motif
Other DBs
NCBI-GeneID:
125833389
NCBI-ProteinID:
XP_049368485
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MFAKKLFQKASQYHHNHHHQTNGSGLTASDLNVRATVHYGIPSTASILAVDSVQRLLAIG
TLDGRIKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVSITNENHIQVWNLKSRSVACD
LQWESNITAFSVINGSSFMYVGDEYGTISVLKFHVENRELLQLPYQILWSSLSEATGFPY
SDHQPVVGILPQPFTSGNRLLIAYECGLIILWDVVEAHVIIVKGDKDLHLKDGALNFKKN
ADSSSPDDVVQHQLEEKEITTLCWASTDGSILAAGYIDGDILLWKTSKSTASKGQEAGPF
DNVVKLQLSSVEKRLPIIVLHWWANSKSRNNSDGHLLIYGGDEIGSDEVITILTLEWSSG
IETLKCVGRVDLTLSGSFADTILLPTTGATSPDEKAVLFVLMSPGQLNLFDCSTLSDLVS
KEEKKVSLSAKDFPVELPTVDPSMTVTKLTQLHSDGNLTELLQETPFFKKLSAATSSGAS
RWPLTGGVYNHTSRAETNRIQRVFIAGYQDGSVRMWDATHPVLLLLCVLDREVKGVNTVI
SSASVSKIDFCFQTLRLAVGDASGLVRLYDFKHSDMGNFHVVTGTKSEVHELAQGQGPTC
RAVLKLLDVRVRAIEFVNHGAKLAVGYENAKVAVLDMTSLSVLFLSDSASVGSSPLVTLI
AKRFVHSDSNSKSPKQSELPENRMEELMFILTEDAKIYVIDGGNGKTYGSGPLHLKKVST
AISMYVIENNIPFSDVISKQPESSKDDATSNEPSQEMTTHDLSDTVPFLENDPSRKHFEE
SFILLCCKDSIRTYATKSVVHGDNKSVCKVKLDKPCCWTTTFVKDGKDGKACALLLLFQT
GDIEIRSLPDLELLERASLMSVLSWNFKPNMDRAMSSMENGHITLANGSELAFVSLLASE
NDFRIPESLPSLHDEVLAAAADAAMKFSTQKKKQGGAPNILGTLVKGFKAGKTNHNMNFS
QMSQSNFSHLEGVFMKNPLHPEPSPTKEVLEELELDIDDIEIDEPVPVASTSSHNTQNSK
TGTEREKLLDSEGDDAKPRLRTREEIIAKYRKTGVQDASSAAGQARDKLLERQEKLERIN
RRTEELRSGAEDFASLANELVKVMENRNRKWWQI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaagaagctttttcagaaagcctcacaatatcatcataatcatcaccaccag
acaaatggaagtggtttgacagcaagtgacctgaatgttcgtgctactgtacattatggt
atcccgtcaaccgcatcaattcttgcagtagactctgtccagcgcctattggctattgga
acattggatggtaggataaaagtgattggtggagacaatattgaaggtctcttgatttct
ccaaagcagttgccatacaaatatttagagttccttcaaaatcagggctttcttgtcagc
atcacaaatgaaaatcatattcaggtttggaatctcaaaagcagatctgtagcttgtgat
ttgcaatgggaatcaaatataactgccttttcagttatcaatggctcttccttcatgtat
gttggagatgaatatggaacaatctcagttttgaagttccatgttgagaacagagaactg
ctgcaactgccatatcagatcttatggagttctctttctgaagcaactggttttccgtat
tcagatcatcaaccagttgttggaattctcccgcaaccttttacatcgggaaatagatta
ttgattgcatatgagtgtggtttaattatactttgggatgtcgtcgaagcccatgttatc
attgtcaaaggtgataaagatctccatttgaaggatggtgctttaaactttaaaaagaat
gcagattccagctctcctgatgatgtagtgcagcaccaattagaggagaaagaaataact
acactttgctgggcatccactgatggatccattcttgctgctgggtacatagatggagat
attctgctttggaaaacatcaaaatcgaccgcaagcaaaggtcaggaggccggaccattt
gataatgttgttaagctacagctgtcttctgttgaaaagaggcttccaattattgtctta
cactggtgggcaaacagtaaatcccggaataatagcgacggtcatctcctcatttatggc
ggtgatgaaataggatccgatgaagtcattacgatccttactcttgagtggtcatctgga
atagagactttgaaatgtgttggtcgtgttgacctcactcttagtggctcatttgcagat
acgatcttattaccaactacaggggcaacatcacctgatgaaaaagctgttttatttgtg
ttgatgagccctggacaactaaacctttttgattgttcaaccttgtctgacttggtatcc
aaagaggagaaaaaagtatctctttccgctaaggattttcctgtagaattgccaactgtt
gatccttccatgacagtgacaaagcttacccagttgcattcagatggaaacttaacagag
cttctgcaagagacacctttcttcaagaagctctctgcagcaacatcatctggggctagc
agatggcccttgactggaggggtttataatcatacttctcgagctgagactaacaggatt
cagagagtttttatagcaggttatcaggatggatccgtaaggatgtgggatgccactcat
ccggtcctccttctcctttgtgtcttggatagagaggttaaaggtgtaaatacagttata
tcaagtgcttcagtttcaaaaatagatttctgcttccagacattaagattggcagttggg
gatgcaagtggcctggtgcgtctttatgatttcaaacatagtgatatgggaaacttccac
gttgttactggtactaaaagtgaagttcatgagttggcacaaggtcaaggacctacttgc
agagctgttctaaagcttctcgatgttcgagtccgagcaattgagtttgtaaatcatgga
gccaaacttgcagttggatacgaaaatgctaaggttgcagtgcttgatatgacttcatta
tcagtattgttcttatcagactccgcatctgttggtagctctccactggtgactttgatt
gcaaagagatttgtgcacagtgacagtaatagcaaaagcccaaaacaatcagagcttcca
gaaaaccgtatggaggaactcatgttcattttaactgaggatgcaaagatctatgtaatt
gatggtggtaatggtaaaacgtatggttcagggcccttgcatttaaagaaagtgtcgact
gcaatttctatgtatgtcatagaaaacaacatcccattttccgatgtaattagcaagcag
ccagagtccagcaaggatgatgcaactagtaatgagccttcacaagaaatgaccactcat
gatctaagtgacacggttcccttcctagaaaatgacccctccaggaaacactttgaggag
tcctttatcctactttgctgtaaagattcaatacgcacttatgctactaaatctgtagtt
catggggataataaatctgtttgcaaagtgaagcttgacaaaccttgttgttggactact
acttttgtgaaagatggcaaagatgggaaagcttgtgcgctactattactctttcagact
ggagatatcgagattcgatctttgcctgatctagagttgctggagcgggcctctttaatg
tcagtattaagttggaatttcaagccaaatatggacagggcaatgagttccatggagaat
ggccatattactctggcaaatggttctgaactggctttcgtgtccctattagctagtgaa
aatgatttcagaattccagaatctttgccgtctcttcatgatgaagtgctcgcagctgca
gcagatgctgccatgaaattctccactcagaagaagaaacagggtggggccccaaatatt
ttaggtactctagttaaaggatttaaagcgggaaagacaaatcataatatgaatttcagt
cagatgtcgcagtcaaactttagtcatctggaaggtgtttttatgaagaacccactccac
ccagaaccgtccccaactaaggaagttctagaagaactggagctcgatatagatgatatt
gaaattgatgaacctgttcctgtggcttctacttcatctcataacacacaaaatagtaaa
acaggaactgaaagagaaaagttgcttgattctgagggtgatgatgccaaacccagactt
aggacacgtgaagaaatcatagcaaaatatagaaaaactggggtccaggatgcatcatca
gcggctggacaagcaagagataagcttttagaacgccaagaaaaactcgagagaattaac
cgaagaactgaagaactacgcagtggggctgaagattttgcatcattggcaaatgagctt
gttaaggtaatggaaaatcgcaatcgaaaatggtggcagatatga
DBGET
integrated database retrieval system
