Solanum verrucosum: 125833421
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Entry
125833421 CDS
T11474
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sver03032
]
125833421
03400 DNA repair and recombination proteins [BR:
sver03400
]
125833421
Enzymes [BR:
sver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
125833421
DNA replication proteins [BR:
sver03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
125833421
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125833421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
125833421
NCBI-ProteinID:
XP_049368526
LinkDB
All DBs
Position
Unknown
AA seq
819 aa
AA seq
DB search
MTGEMAVNGKIQQKLTTPIGLGKALSIYFPGIDFHVGDPQFRLASELVHFFSAPSGEQFV
SQVKEVDGTFLLPLDFQQFQKLCELQEFYTILESKSKDALLCMSAALHKIYFMKLGDESF
DDFVKINIRLHNYPQSMIALKNLKAAYIDRLVSVRGTVVKVSTVKPLVMQMCFACTKCGT
SITRDFPDGKFSPPPVCELHGCKCRTFNPIRSTARIIDFQKIRIQELLKSEHHEEGRVPR
TVECELTEDLVDACIPGDIVTVTGIIRVINNYMDIGGGKSKGKNQGLYYLYLEVVSITNS
KSQSTPEGSQDNPNARATELFDLYSFSPKDLEFIVKFSEEHGSDVFRQILQSVCPSIYGH
ELVKAGITLALFGGVRKHSMDQNKVPVRGDIHIIIVGDPGLGKSQLLQAAASISPRGIYI
CGNATTNAGLTVAVVKDPLTGDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEAMEQQ
CVSVAKAGLVASLSARTSVLAAANPAGGHYNRAKTVNENLKMNGALLSRFDLVFILLDKP
DEVLDKRLSEHIMSLHAKSVEQPPVTKRLCTASLDVREIDMNTKQGSLVARLRLDPKKDS
GFVPLPAPLLRKYIAYARTYIFPRLSNVLCLVFESFCYSLKCLFIFLSFGARMTKPAAEI
LQKFYLKLRDHNTSGDGTPITARQLESLVRLAGARARVDLREEITEQDALDVVEIMKESL
YDKYVDEHGFVDFGRSGGMSQQKEAKRFLSALHKQSELQQKDCFSISEIYCLADRIALMV
PDIDTFVDNLNSVGYLLKKGPKTYQVLSSSYSQTSRSRG
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagaaatggcggtgaacgggaagattcaacagaaattgacgacgcctatcggt
ctcggtaaagcactgtcgatttatttccccggtatcgatttccatgtcggcgacccacaa
ttccgactcgcctctgagcttgttcacttcttctctgctccttccggtgaacaattcgtt
tctcaggtgaaggaggttgacggcacgttcttattgccactggactttcagcaattccaa
aaactttgtgagctccaagaattttatacaattttagagagtaaatctaaagatgctctg
ttgtgtatgagtgctgcattacacaagatttactttatgaaattgggggatgaaagtttt
gatgattttgtgaagataaatatacgtctccacaactatcctcaatcaatgattgcattg
aagaacctaaaagctgcttatattgataggcttgtctctgtacgtggtacagtggtaaaa
gtcagcacagtcaagcctctggtgatgcaaatgtgttttgcatgtactaagtgcggaacc
agtattactcgtgactttccagatggaaaattttcacctccaccagtatgtgaattgcat
ggttgtaaatgtaggacttttaatcccataaggtctacagctcgaattatagactttcag
aaaataagaattcaggagctgctgaaatctgaacatcatgaagagggacgggtacctcga
actgttgaatgtgaactaactgaagatcttgtggatgcatgcatccctggggatattgtg
actgtcactggtattattagggtgattaacaattacatggatattggaggaggaaagtca
aaaggcaagaatcaaggactttattatttgtacctagaagtagtttctattacaaactcg
aagtctcagtcaacacctgagggttcacaagataaccctaatgctagagctacagagcta
tttgatttatactcattctctccaaaggatttggagtttattgttaagttttctgaagaa
cacggttctgatgtctttcgacaaatacttcaatctgtttgcccctcgatctacggtcac
gagcttgttaaagcgggaattacattagctttatttggtggtgtacggaagcattccatg
gatcagaataaggttcctgtgagaggagatatccacataataattgtcggtgatcctgga
ttgggtaaaagtcaactacttcaagcggcagcttccatttctccccgtggcatatatatt
tgtggtaatgcaacaactaacgctggccttactgttgctgttgtcaaggatcctttgacc
ggtgactatgcgtttgaagcaggtgctatggttcttgccgatcgtggattatgttgcatt
gacgagtttgacaaaatgtctgctgaacatcaggccttattggaggctatggaacaacag
tgcgtctctgttgcaaaggcaggacttgttgcaagtttgtcagcgcgaacatctgtttta
gcagcagcaaaccctgctggtggccactacaaccgtgcaaaaactgtgaacgagaacttg
aagatgaatggtgctttgctttcacgatttgatttggtgttcatattacttgataaacct
gatgaagtgctggacaagcgactctctgagcatattatgtcacttcatgcaaaaagtgta
gagcagccaccagtcacaaaacggttatgtacagcctcgctggatgttagagaaattgac
atgaatacaaaacagggttctttagttgcaaggctgagacttgaccctaagaaagacagt
ggttttgttccattgcctgcccctcttctgcgtaaatacattgcttatgcaagaacttat
atatttcctaggttgtcaaatgtgctttgtcttgtgtttgaaagtttttgctactcttta
aaatgtttatttatcttcttgtcatttggtgcaaggatgacaaaaccagcagcagaaatc
ttgcagaagttttacttgaagttgagggatcataatacgtccggtgatggtacaccgata
accgcaaggcaattagagagcttggtaaggttggcaggagctcgagctagagtagatcta
agagaagagataactgagcaagatgctctggatgttgtggaaataatgaaagaatcatta
tacgataagtatgttgacgagcatggatttgtggattttggacggagtgggggaatgagt
cagcagaaagaagcaaaacggtttttgagtgccttgcataagcaatcagaattgcagcaa
aaggattgcttttcaatttctgaaatatattgtctggcagatcggattgcattaatggtt
ccagatatcgacacattcgtggataatcttaatagtgttggttatttactaaagaagggt
cccaagacatatcaggtgctatcttcatcttattcacaaacatcaaggtcaagaggatag
DBGET
integrated database retrieval system
