Solanum verrucosum: 125833449
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Entry
125833449 CDS
T11474
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
sver Solanum verrucosum
Pathway
sver00100
Steroid biosynthesis
sver00909
Sesquiterpenoid and triterpenoid biosynthesis
sver01100
Metabolic pathways
sver01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
125833449
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
125833449
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sver01006
]
125833449
Enzymes [BR:
sver01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
125833449
Prenyltransferases [BR:
sver01006
]
Terpene biosynthesis
Squalene/phytoene synthase
125833449
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
125833449
NCBI-ProteinID:
XP_049368569
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All DBs
Position
Unknown
AA seq
398 aa
AA seq
DB search
MGEIMKHPDELYPLMKLMLSAKRVKKKTSVWLLQPHWAFCYATLRKVSHSFALVIQQLPS
ELCNVVSYSLCFNLFCVYYLILRELDTVEDDTSLTTEVTLPILKDFYCHLHDPEWHFSCG
TMAFKVLMDQFHHVSIAFLELDTNYQEVIKDITKRMGEGMAKFLCKEMIRTIDDYNEYCH
YAAGFCGLGLSKLFYASGREDLAPDSLSISMGLFLQKISIIRDYLEDINEVPKCRMFWPR
QIWSKYVNKLEDFKYEENSVKAVQCLNEMVTNALLHVEDCLVYMSNLRDPAIFQFCAIPL
VINMGNLTMNYNNVEIFKGVVEMRRGLCAKIIDQMRTMADVYGAFFDFCCIMESKVDRDD
PNATSTLKRLEEISKTCRNSGTLINQRKSYTFSHQPSA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattatgaagcatccagatgaattatatccattgatgaagctcatgctatcg
gctaaacgtgtcaagaagaagacgtcagtgtggctgttgcagccacactgggccttctgc
tacgctactctccgtaaggtgtctcatagctttgctcttgtcattcaacaacttcctagc
gaactttgtaacgtggtaagttactctctatgtttcaatttgttttgtgtttactatttg
attcttagagaacttgatactgttgaggatgataccagcttaacaactgaagttacatta
cccatcttaaaagatttttattgccatttacatgatcctgaatggcatttttcatgtggt
acaatggcctttaaagttcttatggatcaattccatcatgtttccattgctttcctagag
cttgatacaaattatcaagaggtgattaaggatattaccaagaggatgggtgaaggaatg
gcgaaatttctatgcaaagagatgattcgaacaatcgatgattataatgaatattgtcac
tatgcagctggattttgtggattgggattgtcaaaacttttttatgcttctggaagagaa
gatttagcaccagactccctctcgatttccatgggtttatttcttcagaaaataagcatc
attagagattatctagaggatataaatgaagtacctaaatgtcgtatgttttggcctcgt
caaatttggagtaaatatgttaacaaactcgaggactttaagtacgaggaaaactcggtc
aaggcagtacaatgtctgaatgaaatggtcactaatgctttattacatgtagaagattgt
ctggtttacatgtctaatttacgagatcctgctatctttcagttctgtgcaattccactg
gtcataaatatggggaatttgacgatgaactacaacaacgttgaaattttcaaaggtgtt
gtagaaatgagacgaggcctttgtgctaagattattgatcaaatgaggacgatggctgat
gtctacggagctttctttgacttttgttgtataatggaatctaaggttgatcgtgatgat
ccaaatgcaacgagtactttgaagaggcttgaagaaatttcaaaaacttgcagaaactct
ggaaccttgatcaatcaaaggaaatcttacacattcagccatcagccatcagcctaa
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