Solanum verrucosum: 125833507
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Entry
125833507 CDS
T11474
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sver Solanum verrucosum
Pathway
sver03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125833507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125833507
03110 Chaperones and folding catalysts [BR:
sver03110
]
125833507
03029 Mitochondrial biogenesis [BR:
sver03029
]
125833507
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sver04147
]
125833507
Enzymes [BR:
sver01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125833507
Messenger RNA biogenesis [BR:
sver03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125833507
Chaperones and folding catalysts [BR:
sver03110
]
Heat shock proteins
HSP60 / Chaperonin
125833507
Mitochondrial biogenesis [BR:
sver03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125833507
Exosome [BR:
sver04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125833507
Exosomal proteins of other body fluids (saliva and urine)
125833507
Exosomal proteins of breast cancer cells
125833507
Exosomal proteins of colorectal cancer cells
125833507
Exosomal proteins of bladder cancer cells
125833507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
125833507
NCBI-ProteinID:
XP_049368626
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MASTFAGMSSAGPLAAPSTSSNKLSSVANISSTSFGSKRNVALRKSRRQTILAAAKELHF
NKDGSAIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGAPKIVNDGVTVAREVELEDPV
ENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTAKA
LVAELKNMSKEVEDSELADVAAVSAGNNLEVGSMIAEAMSKVGRKGVVTLEEGKSAENSL
RVVEGMQFDRGYVSPYFVTDSEKMSVEYENCKLLLVDKKITNARDLVNVLEDAIRNGYPI
LIIAEDIEQEALATLVVNKLRGALKVAALKAPGFGERKSQYLDDIATLTGGTVIREELGL
TLDKADKEVLGHAAKVVLTKDATTIVGDGSTQEAVNKRVAQIKNLIEAADQDYEKEKLNE
RIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVD
AIKGTLANDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDDPKFGYNAATGN
YEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEAAVAGNPMDNSGYGY
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcatctacttttgctggtatgtcctcagcaggtcccttggctgctcccagcacttcc
tcaaacaagctttcctctgttgctaatatatcttccacctctttcgggagcaaaagaaat
gttgcactaagaaagtcacgcaggcagacaattttggctgcagctaaagagttgcacttc
aacaaggatgggtcagctatcaagaagctacagaatggtgtgaacaaacttgctgatcta
gttggagttactcttggcccaaaaggcaggaatgttgtccttgagagcaagtatggtgct
ccaaaaattgttaatgatggagttactgtggccagagaggttgaattagaggatccagta
gaaaacattggtgcgaaactagtgagacaagctgctgccaaaaccaatgacctggctggg
gatgggactacaacatctgtcgtgctagctcagggcctaattgctgaaggtgttaaggtg
gttgcagctggtgcaaaccctgtcctaatcaccagaggaattgagaagacagcaaaagca
ttagtagctgagttgaagaatatgtcaaaagaggtggaagacagtgaactagcagatgtg
gctgcagtaagtgctgggaacaatttggaagtagggagtatgattgctgaagccatgagc
aaggttggaaggaaaggtgttgtgacactagaggagggtaaaagtgctgaaaacagtctg
cgtgtggttgaaggaatgcaatttgaccgtggttacgtctctccttactttgttaccgac
agtgagaaaatgtcagttgaatatgagaactgtaagttgctactggttgataaaaagata
acaaatgcaagagatcttgttaatgtcctggaagatgctatcagaaatggttacccaatt
ttaattattgccgaagatattgagcaagaagctttggcgactcttgttgtcaataagctt
agaggtgccttaaaggttgctgcacttaaagctcctggttttggtgagcgaaaaagccag
tatcttgatgacatagcaacccttactggaggcactgttattagggaggaacttggcctt
accttggacaaggctgacaaggaagttctaggccatgctgctaaagtagtgctgactaag
gatgccactacaattgttggtgatggtagcactcaggaagcagtcaacaaacgtgttgct
cagattaaaaacctgatagaggctgcagatcaagattatgaaaaggaaaagctaaatgaa
agaattgctaagttatcaggaggtgtggctgtcatacaggttggagctcaaactgaaact
gaattgaaggagaagaaacttagagtggaagatgctctcaatgcaacaaaggcggctgtt
gaggaaggtattgttgttggaggagggtgcacgctcctcagacttgctgcaaaagttgat
gcaataaagggaacccttgcaaatgatgaggagaaggttggagctgatattgtcaaaaga
gcattgagctaccctttgaaattaattgctaaaaatgctggcgttaatggaagtgttgtc
agtgagaaggtgctgtcaagtgatgatcccaaatttggatataatgctgcaactggcaac
tatgaagacttaatggctgctggcatcattgatccaaccaaggtggtgaggtgttgtcta
gaacacgctgcatctgtggctaagacattcttgatgtcagattgcgtggtggttgagatc
aaggagcccgaagcagcagttgctggcaacccaatggacaactcaggatacggttactag
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integrated database retrieval system
