Solanum verrucosum: 125834247
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Entry
125834247 CDS
T11474
Name
(RefSeq) protein argonaute 7
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125834247
03036 Chromosome and associated proteins [BR:
sver03036
]
125834247
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125834247
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125834247
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125834247
microRNA pathway
RISC loading complex
125834247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125834247
NCBI-ProteinID:
XP_049369372
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MEQTENSNKCNSKSTTAKICPNNNNNNNNHYIAFGFHHNTNNTNNQNQYQTYPPLLPLPP
LLPPLQLPFPQNHNFRSRTHVHKPSFNQNHPFLATPSDSKIQEISASKVLQRQNDVSKQK
YGRRVKAAATTTESLVVARRPDSGGVEGPVISLLANHFLVQFDPSQRIFHYDVEISPHPS
KDIARLIKKKLVEDHSVMLSGALPVYDGGRTIYSPIEFQNNKIEFYISLPIPSSGNKSGE
MVKLQKEGQQIKLFRVNIKLISKFDGKELNSYLNKEGDDSGSPLPQEYLHALDVVLRESP
TEKCITAGRSFYSSCMGGEKDIGGGAVALRGFFQSLRPTQQGLALNVDFSVTAFHESIGV
ITYLEKRLDFLHDISHRKTRGLTNDEKKEVEKALKNIRVFVCHRETVQRYRIYSLTEEVT
ENLCFQDRDGKILRIVNYFKDHYNYDILYRNLPCLQISRSKPCYLPMELCMICEGQKFLG
KLSDDQTARILKMGCQRPRERKAIIDRVVTGSVGPTSGNHASDFKLQISKEMTQLYGRIL
QPPKLKLGDRGQVRNLIPSRLDRQWNLLDSHVFEGTRVERWALMSFGGTSDQKSHIPKFI
NQLCQRCEQLGIFLNKNTVLNPQFEPLHLLNNVKNLETKLNKLHRASFNNLQLVICVMER
KHKGYADLKRIAETSIGVVTQCCLYPNLGKISSQFLANLALKINAKVGGCTVALYNSLPS
QIPRLFKHEGPVIFMGADVTHPHPLDDFSPSVAAVVGSVNWPAANKYVSRMRSQTHRQEI
IQDLNTMVGEIIDDFYEELLKLPERIIFFRDGVSETQFLKVLKEELQAIRLACSRFPGYK
PPITFVVVQKRHHTRLFPCELHPSTTKNTLFNENILPGTVVDTVITHPSEFDFYLCSHWG
VKGTSRPIHYHVLWDENQFTSDELQKLVYNLCYTFVRCTKPISLVPPAYYAHLAAYRGRL
YLERSDLSTLTRSSNISRAAPPKTTPLPKLTENIKKLMFYC
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaactgaaaactccaacaaatgcaactctaaatcaacaactgccaaaatatgt
ccaaataacaacaacaacaacaataatcactatattgcttttggttttcatcacaatact
aataatactaataatcaaaatcaatatcaaacttaccctcctcttctccctttacctcct
ctactacctcctcttcaactaccttttcctcaaaatcacaacttcagatcaagaacccat
gttcacaaaccttcattcaaccagaatcatccttttcttgccaccccttctgattccaag
attcaagaaatctcagcctcaaaggtgctccaaaggcaaaatgatgtgtccaaacagaaa
tatggaaggagggttaaggctgctgctaccaccacagaatctcttgtggtggcaagaaga
ccagattctggtggtgttgaaggaccagtaatctcacttcttgctaatcatttccttgtc
caatttgatccttcacagagaattttccattatgatgttgaaatttcacctcatccatcc
aaggatattgctaggctaatcaagaaaaagcttgtggaggaccattctgttatgctatca
ggtgctcttccagtttatgatggtggaaggactatatatagccctattgaatttcaaaat
aataagattgagttttacattagcctgccaattcctagtagtggcaacaagtctggagaa
atggttaagttgcagaaagaaggacagcagattaagcttttccgcgttaacatcaaactt
atatctaaatttgatgggaaagaactaaatagctacttgaataaagaaggagatgatagt
gggagtccacttcctcaggaatatctgcatgcattagatgtcgtgttgcgcgagagccca
acagagaaatgtataacagctgggagatcgttttactcgagttgtatgggaggagaaaaa
gatatcgggggcggagccgtggcgctaagggggttctttcagagtcttagaccaacacag
caaggacttgctctcaatgttgatttctcagtgactgctttccatgagagtatcggagtg
atcacctacttggaaaaacgccttgacttcctccacgacatttctcacaggaaaacaaga
ggcttgacaaatgatgagaagaaagaggttgagaaagcactaaagaacatcagggtcttt
gtttgccacagagagactgttcaaagatatcgtatttacagcttaaccgaggaggttacg
gagaacctctgctttcaggatagggatggaaaaattctaagaatagtgaactacttcaag
gatcattacaactatgatatactatataggaacttgccgtgcttgcagattagcagaagt
aaaccttgttatcttccgatggagctttgtatgatttgtgaaggacagaagtttctaggg
aagctttcggatgatcagactgcaagaatactcaaaatgggatgtcaaaggccaagggaa
agaaaggcaattatagacagagtggtgacaggatcggttggaccaacaagtggcaatcac
gcgagtgacttcaaactccaaatctcgaaagaaatgactcaattgtatgggagaattctt
cagcctcctaagcttaaactaggtgatcgtggtcaggttagaaatcttattccttcccgg
ctcgataggcagtggaatcttctggacagccatgtcttcgaaggtactcgagttgagaga
tgggcactaatgagttttggtggaacctctgatcagaagtcccacataccaaaattcata
aaccagttatgtcaaaggtgtgagcaattaggcatctttctgaacaagaatacagtactt
aaccctcagtttgaacccttgcatttgctcaacaatgttaaaaacttagaaaccaaactc
aacaagttacatagagcttcatttaacaatctccaacttgttatttgtgtgatggagaga
aaacacaaaggatacgcagacttgaaaagaattgctgagacaagcatcggggttgtaaca
caatgctgtttgtacccgaaccttggcaaaattagctcacagtttttggcaaatttggct
ctcaagatcaatgccaaagttgggggatgcacagttgcattgtacaattcattgccttct
caaataccacggctcttcaaacatgaaggtccagtcatttttatgggtgcggatgtgact
catccgcaccctcttgatgattttagcccctccgtcgctgctgtagttggtagtgtaaat
tggccagcagccaacaagtatgtctccaggatgagatcccaaacacataggcaggagatc
attcaagatctcaacacgatggtcggggagattattgatgatttttatgaggagctgcta
aaactccctgagagaataatcttcttcagggatggagtaagtgaaacacaattccttaaa
gtacttaaagaggagctccaagcaattcgcctggcatgttcgagatttccaggttacaaa
cctcccattacttttgtggtagttcagaaaagacaccatactaggctatttccatgtgaa
cttcatccgtcaacaactaaaaacacgctcttcaacgaaaacatcctaccaggtacagtt
gtagatacagtgatcactcatccaagtgaattcgacttctatctatgcagccattggggt
gtaaaaggaacaagcaggccaatacattaccatgttctatgggatgaaaaccagttcact
tctgatgagctacaaaaattggtatacaacctttgctacacatttgtgagatgcaccaag
cctatttcactggtgccaccggcttattacgcccatttagctgcatatagaggcagactg
tatcttgaacgttccgatttgtctactctaacaagaagttctaacatatctcgcgctgct
ccaccgaagacaactcctttacctaaactcactgagaacattaaaaagcttatgttttac
tgctga
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