Solanum verrucosum: 125834328
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Entry
125834328 CDS
T11474
Name
(RefSeq) polypyrimidine tract-binding protein homolog 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sver03041
]
125834328
Spliceosome [BR:
sver03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125834328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_10
MCM3AP_GANP_C
DUF8400
Motif
Other DBs
NCBI-GeneID:
125834328
NCBI-ProteinID:
XP_049369436
LinkDB
All DBs
Position
Unknown
AA seq
452 aa
AA seq
DB search
MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
EFAELNQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVAGNVLLVTIEGN
DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETATSAKDALDGRSIPRYL
IPELGPCSFKITYSAHTDLSVKFQSHRSRDYTNPLLPVAPSAIDANGQISVGLDGKKLEP
ESNVLLASIENMQYAVTLDVLHTVFSAFGPVLKIAMFDKNGGVQALIQYPDVQTAVVAKE
ALEGHSIYEGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNVPMMNAQPPMMNSQPSVMG
QQPPSVGGPDVHPYNGPTQYAPAPQGFGAPQHSAAGWNSPVGSTPPQMPMQMHNHHYSMP
ASGPPQMGHGRMPMHGQNGLPHSGGMPPYHPQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgtatctagccagcctcaattcagatacacgcagcctccctctaaggttctt
catttaagaaacttgccatgggagtgcacagaagaggaactgattgaattggggaagcca
tttggtaaagttgtcaataccaagtgtaatgttggagcaaatagaaatcaagcatttata
gagtttgcagaattgaatcaagctattgcaatgatatcgtactatgcgtcttcctcagaa
ccggctcaggtacgagggaaaaccgtctacctacagtattctaacaggcaagagatagtg
aacaacaaaactactgctgatgtagctggaaatgtattattggtaactattgagggaaat
gacgcacgcctcgtcagtattgatgtcttacacttggtgttctcagcttttggatttgtc
cataagattacgacatttgagaaaactgctggattccaggctctagtgcaattttctgat
gcagaaactgccacttctgcaaaggatgcccttgatggaagaagcattcccaggtatttg
attccagaactgggaccttgctccttcaaaataacatattctgcacatactgatctgagt
gtgaagtttcagagtcatcgtagcagggactacaccaatcctctccttcctgttgctccc
tcagccattgatgcaaatggtcagatcagtgtgggtttagatgggaagaagctggagcct
gagagtaatgttcttctagcttccattgagaacatgcaatatgctgtaaccttggatgtc
ctacacacggttttttcagctttcggccctgtgctaaagattgcaatgtttgataagaat
ggtggggttcaggctctaatacaatatccagatgtgcagacagcagttgttgcaaaggaa
gctttagaaggacattccatatatgaaggaggattttgtaagcttcatatctcctactct
cgccacactgatctcagtataaaggtgaataatgatcgcagcagagattatacaatcccg
aatgtccctatgatgaatgcccaaccccctatgatgaactctcaaccctcagtcatgggg
cagcaaccaccttctgtaggaggtccagatgttcatccatacaatgggcctacacaatat
gccccagcccctcaaggttttggtgcacctcagcattcagcagcaggctggaactcacct
gttggttctacacctccacaaatgccgatgcagatgcacaatcaccattattctatgcca
gcaagtggacctcctcaaatgggtcatgggaggatgccaatgcatggacagaacggccta
ccacattccggtggaatgcctccttatcatccacaatag
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