KEGG   Solanum verrucosum: 125835016
Entry
125835016         CDS       T11474                                 
Name
(RefSeq) sm-like protein LSM36B
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
sver  Solanum verrucosum
Pathway
sver03018  RNA degradation
sver03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125835016
  09123 Folding, sorting and degradation
   03018 RNA degradation
    125835016
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sver03019]
    125835016
   03041 Spliceosome [BR:sver03041]
    125835016
Messenger RNA biogenesis [BR:sver03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125835016
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     125835016
Spliceosome [BR:sver03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    125835016
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 125835016
NCBI-ProteinID: XP_049370114
LinkDB
Position
Unknown
AA seq 91 aa
MSGAGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLGEGA
NT seq 276 nt   +upstreamnt  +downstreamnt
atgagtggagcaggagagaagggatcaacaaccaccaagactccagcagattttctcaag
tctattcgtggacgacctgttgttgtcaaattgaactctggtgttgactatcgaggtatc
cttgcctgtttagatggatacatgaatatagcaatggagcaaaccgaagaatatgttaat
gggcaattgaagaacaaatatggtgatgcctttatacgtggaaataacgtgctctacatc
agcacatcaaagaggacactaggggagggagcttaa

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