KEGG   Solanum verrucosum: 125835186
Entry
125835186         CDS       T11474                                 
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
sver  Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:sver00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sver04131]
    125835186
   04121 Ubiquitin system [BR:sver04121]
    125835186
Enzymes [BR:sver01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125835186
Membrane trafficking [BR:sver04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    125835186
Ubiquitin system [BR:sver04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125835186
SSDB
Motif
Pfam: zf-RING_2 Zn_ribbon_19 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-RING_5 Zf_IFT144_1st
Other DBs
NCBI-GeneID: 125835186
NCBI-ProteinID: XP_049370266
LinkDB
Position
Unknown
AA seq 362 aa
MDGRGASRYWCHHCSRRVNPMMEVELKCPICQLGFIEEMGSDTTETPLDSDSDSDSDRAL
SLWAPILLGMMTNPRRRSRLRHLEFEDDDDDDHTREADTQLDPDLASIINRRRRNSATIL
QLLQGIRAGMLAESENPNPENENRETGRESRDLERVILINPFNQTIIVQGSDNNSRNQPI
GSLGDYFIGPGLDVLLQHLAENDPNRYGTPPAQKEVVQALPVVTIDETLQCSVCLEDFEI
GTEAKEMPCKHRFHGDCILPWLELHSTCPVCRHQLPSDESKVESAGTNDGSGSNTNAQSS
NGNGRRYEDEDTSNENGRPFPVSLPWPLSGLFSSPNSGSNGNSSSMTSSASNANSNAHMH
ED
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggacggaagaggagcgtcaagatattggtgtcatcattgttcaaggagggtgaacccc
atgatggaggttgagttaaaatgtcccatttgtcaactaggatttattgaagaaatggga
tcagacactactgagacgcctttagattctgattctgattctgattctgatcgtgccctc
tcactttgggcacctatcttgttaggcatgatgaccaaccctcgtcgtcgttctagactt
aggcatctcgaatttgaagatgatgacgatgatgatcatacacgtgaagccgatacacaa
cttgatccagacttggcatctataataaataggcgcaggaggaactctgccacaattctc
cagctcttgcaaggtattcgagctggaatgttggctgagtcggagaaccctaaccctgag
aatgaaaacagggagacaggtagagagagtagggatcttgagcgtgttatacttataaat
ccattcaatcaaaccatcattgtgcagggttcagataataattccaggaaccaacctatt
ggctcattgggtgattatttcattggtcctggtttagacgtgttgctgcaacatttggca
gagaatgatccaaataggtatggtactccaccagctcaaaaagaggttgtacaggcattg
cctgtggtgacaattgatgagacattgcagtgttctgtctgtttggaagactttgagatt
gggactgaagccaaagagatgccttgtaagcacaggtttcatggtgactgcatcttacca
tggctggagcttcatagcacatgtcccgtctgtaggcaccagttgccctctgatgaatca
aaagttgagtctgctggaaccaatgatggaagtggtagtaacacaaatgctcagagtagt
aatggtaatggtagaaggtatgaagatgaggatactagtaatgaaaacggtcgcccgttt
ccagtgtcacttccgtggcctttgagtggcttgttttcatccccaaactcaggtagtaat
ggaaattcatcatcaatgacgtcttctgcatcaaatgcaaactccaatgctcatatgcat
gaggattaa

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