Solanum verrucosum: 125835256
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Entry
125835256 CDS
T11474
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
sver Solanum verrucosum
Pathway
sver03015
mRNA surveillance pathway
sver04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125835256
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125835256
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sver01009
]
125835256
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125835256
03036 Chromosome and associated proteins [BR:
sver03036
]
125835256
Protein phosphatases and associated proteins [BR:
sver01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125835256
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125835256
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125835256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WDR55
Beta-prop_NOL10_N
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
125835256
NCBI-ProteinID:
XP_049370342
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MKGDVGGEVAEAPAGPPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDR
GGRVVLFERTDTKELVGSQRELERVDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKI
NKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNIDPSKAAGNGSVASSSLCSS
PKQCLANGGCGDKAYSSSSNDLSFPPEGIPSLRLPMVTSNETSLLARCRRVYAHAHDYHI
NSLSNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCN
TLAYSSSKGSVRLIDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFAKDGRYI
LSRDYMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG
SYSNLFRVFGCAAGSTEATTLEASKNPMRRQVQTPSRPSRSLSSSLTRVVRRGADNASVD
ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgatgttggtggagaagtcgcggaagctccggcgggtccaccaccgccgcta
gagtggaaattttcacaggtttttggtgagcgtacggctggtgaagaagtgcaggaagtt
gatatcatctcagcaattgagtttgataaatctggtgaccatcttgccactggggatcgt
gggggtagagtggtattgtttgaaaggaccgataccaaggagctggttggaagtcaacga
gaattagagagagtggactatccagttagtcggcatccagagttccgctacaagacagaa
tttcaaagccatgagcctgagtttgattatttgaagagtttggagattgaggagaaaatc
aacaagatccggtggtgccaaacagcaaatggtgcccttttccttctatctactaatgac
aaaactatcaagtattggaaggtccaagagaagaaagttaagaaaatatctgaaatgaat
attgacccttcaaaagctgctggaaatggcagtgtagccagttcgagtttatgttccagc
ccaaagcagtgtcttgcaaatgggggctgtggagataaagcttacagttcttcgagcaat
gatttatcatttccgcctgaaggcatcccctcactgcgcttgcccatggtaacgagcaac
gagaccagccttcttgcaaggtgtagaagagtgtatgcacatgctcatgactaccatatt
aattctttatccaataacagtgatggtgaaacattcatatcagccgatgatctccgaata
aacctttggaacctggaaataagtaatcaaagtttcaatattgttgatgtcaagccagca
aatatggaagatcttactgaggtgataacatcagcagaattccatcctacacattgtaac
acattagcttatagcagttcaaaaggatcagttcgtttaatagatttgcggcagtcagca
ttgtgtgactcacattctaaattgtttgaggaacaggaagcacctggttcaagatctttt
ttcactgagataattgcttcaatttcggatataaaatttgcaaaggatggaagatacata
cttagtcgtgactacatgacacttaagctatgggacataaacatggattcaggtccagtt
tcaacattccaggttcatgaatatttaagaccaaagctttgtgacttatatgagaatgat
tccatctttgataaatttgagtgttgccttagtggtgatggtttgcgagtagcaacgggg
tcttacagcaatcttttccgcgtgtttggttgtgctgcggggagcactgaagcaactacc
ttggaagcaagcaaaaatcctatgagaaggcaagtccagactccttcaaggccatccagg
tccctgagcagcagtttaacacgtgttgtcaggagaggagcagataatgcaagtgttgat
gcaaatggaaactcatttgatttcacgacaaaactgcttcatctggcatggcatccgact
gaaaattccatagcctgtgctgccgcaaacagcttgtatatgtattatgcataa
DBGET
integrated database retrieval system
