Solanum verrucosum: 125835317
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Entry
125835317 CDS
T11474
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sver Solanum verrucosum
Pathway
sver00040
Pentose and glucuronate interconversions
sver01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125835317
Enzymes [BR:
sver01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125835317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125835317
NCBI-ProteinID:
XP_049370397
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MTNNIGDDVVKYKVTDKSDDPLNPKPGTLRYAMTHIKGKIWVTFEQNMKIRLQKPLLVSS
FTTIDGRGVKVNIAGGACLMLQRVTNVIIHGLRIHHCKAQTASTVMGPDKKIVNVGAVDG
DAIRMVTSSKIWIDHNTLYESEDGLIDVTRGSTNITISNNWFRTQNKVMLLGHDDGFLRD
KNMKVTVAFNYFGPNCNQRMPRVRHGYAHVVNNVYKGWGNYAIGGSMNPSIKSQANYFYA
PKDGKKEVTWKKESDVVGEVAGNFQSVEDVFANGACFNGSGTGRESVKPNYSPEQAFPVE
DGHKVKELTRNAGALKCSTSSSTC
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactaataatattggagacgacgtagtaaaatacaaagttacggataaaagtgacgat
cccttaaaccctaaacctggaaccctaagatatgcaatgacgcatattaagggaaagatt
tgggtaactttcgaacaaaatatgaaaattagactccaaaagccccttttagttagcagc
tttactaccattgatggccgtggagttaaggttaacattgctggtggcgcttgtctaatg
cttcaaagggtgacaaatgtgatcattcatggtctaagaatccaccattgcaaggcacaa
actgcctcaacagtcatgggacctgataaaaaaattgtaaatgtgggtgcagtggatggg
gatgctattagaatggtgacttcttcgaagatttggattgatcataacaccctctatgaa
agtgaagatggtctgattgatgtgactcgtggttcaacaaatataactatatccaacaat
tggtttaggacacaaaataaggttatgttattaggtcatgatgatggattccttagagac
aaaaacatgaaggttactgttgcattcaactattttggtcctaattgcaaccagagaatg
ccaagggttcgtcatggatatgcacatgtggttaacaatgtatacaagggatggggtaac
tatgcaatagggggaagcatgaacccaagcattaagagccaagctaattatttctatgca
ccaaaagatggaaagaaagaggtcacatggaaaaaagagagtgatgtagttggtgaagtg
gctgggaatttccagtcagttgaagatgtatttgccaacggagcatgtttcaatggatcg
ggtacaggtcgtgagtcggtgaagccaaactattcaccagagcaagcttttccggtggaa
gatggacacaaggtcaaggaattgacaaggaatgcaggtgctttaaaatgttctacctct
tcttctacctgctaa
DBGET
integrated database retrieval system
