Solanum verrucosum: 125835768
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Entry
125835768 CDS
T11474
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
sver Solanum verrucosum
Pathway
sver03030
DNA replication
sver03410
Base excision repair
sver03420
Nucleotide excision repair
sver03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125835768
03410 Base excision repair
125835768
03420 Nucleotide excision repair
125835768
03430 Mismatch repair
125835768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sver03032
]
125835768
03036 Chromosome and associated proteins [BR:
sver03036
]
125835768
03400 DNA repair and recombination proteins [BR:
sver03400
]
125835768
DNA replication proteins [BR:
sver03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125835768
DNA Replication Termination Factors
ELG1-RFC complex
125835768
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125835768
DNA repair and recombination proteins [BR:
sver03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125835768
Check point factors
HRAD17(Rad24)-RFC complex
125835768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_22
Rad17
RuvB_N
AAA_11
Mg_chelatase
AAA_assoc_2
nSTAND3
AAA_16
SLFN-g3_helicase
AAA_5
nSTAND_NTPase5
AAA_14
ResIII
DEAD
AAA_24
AAA_2
PhoH
AAA_28
AAA_18
AAA_19
AAA_7
NPHP3_N
AAA_30
RNA_helicase
AAA_25
DNAX_ATPase_lid
Parvo_NS1
TIP49_C
DUF815
NB-ARC
bpMoxR
TIP49
ATPase_2
Motif
Other DBs
NCBI-GeneID:
125835768
NCBI-ProteinID:
XP_049370823
LinkDB
All DBs
Position
Unknown
AA seq
339 aa
AA seq
DB search
MAPVMQSSQPWVEKYRPKKVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSNRQSGYPCPPFKIIIL
DEADSMTQDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLPEEIMGS
RILHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISAKELISVSGVIP
NEVVQAIFSACRSGNFDLANKEVNNVIAEGYPVSQMLSQLYDIVVDADDISDEQKARICK
KFAEADKCLVDGADEYLQLLNVASSTMQALSNMPQDMAF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttatgcaaagctctcagccatgggtcgagaaatatcgaccgaagaaagtg
aaggatgtagctcaccaggatgaggtcgttcgagtcctcaccaacactctcgagacctct
aactgcccgcatatgttgttttatggtcctcctggaactggaaagacgaccactgctctt
gccattgcccatcagcttttcggacctgagctgtataagtcgagggtattggagctaaat
gctagtgatgaccgtggtatcaatgtagttcgcacaaaaattaagaactttgctgctgtt
gctgtaggttctaatcgtcaaagtggttatccttgcccaccttttaagatcataatcctt
gatgaagcagattcaatgactcaagatgctcaaaatgccttgcgacgaactatggagaca
tattcaaaagttacaagattcttcttcatttgtaattacatcagcaggatcatagagcca
cttgcttccagatgtgcgaagtttagattcaagccacttcctgaagaaataatgggcagc
cgaatattgcatatttgtaaagaggaaggtcttaatctagattcagaggctctttctacc
ctcagttccatttctcaaggtgatttgcgaagggctattacatacttacaaagtgctgct
cggttatttggatcttccatatcagcaaaggaactgattagtgtgtctggggtcatccca
aatgaagttgttcaggctatattctcagcttgcagaagtggcaattttgacttggcaaac
aaagaagtgaacaatgtcattgcagaaggatatcctgtttctcagatgctgtctcagttg
tatgatatagtagttgatgcagacgacatttctgatgaacagaaagcaagaatatgcaag
aaatttgctgaagcagacaagtgtcttgttgacggagcggatgagtatttgcaacttttg
aatgttgcaagcagcacaatgcaagcgcttagcaacatgccacaggacatggcattttga
DBGET
integrated database retrieval system
