Solanum verrucosum: 125836062
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Entry
125836062 CDS
T11474
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sver04131
]
125836062
Membrane trafficking [BR:
sver04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125836062
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_DOCK9
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
125836062
NCBI-ProteinID:
XP_049371103
LinkDB
All DBs
Position
Unknown
AA seq
1836 aa
AA seq
DB search
METSSSGYRFRRIPHHSFAGSLNLDPLLDENLEQWPHLNELVQCYRTDWVKDENKYGHYE
SVSPTSFQSQIYEGPDTDIETEMHLANARRSKIEDSIDGEIPSTSGTQLSEDNFSDLSNA
KVSKHFGESPLPTYEPVFDWENERSLIIGQRIPEAHMSQYTSGLKIAVKVLSLSFQAGLV
EPFYGTICLYNRERREKLSEDFIFHVLPTEMQEASSSYERRCIFHLDAPSASICLLIQLE
KPATEEGGVSPSVYSRKEPVHLTEREKQKLQVWSRIMPYRESFSWAIIPLFDSNIASVGG
SASPSSPLAPSVSASSSQEGITEPLSKITADGKLGYSNGNSIVVEVSNLNKVKEGYTEES
LQDPKRKVHKPVKGVLKLEIEKLPASSTEVENALESGSLIYDSLDHGDHLNDSTSMKCPT
NGSFSKSKSSEMKELVRNGSVTHENVENTADDFEAFDFRTTTRNEPFLQLFHCLYVYPLT
VSMSRKRNMFIRVELRRDDTDIRKPSLEAMHPKEPGVPLQKWSHTQVAVGARVASYHDEI
KVSLPVIWTPSHHLLFTFYHVDLQTKLEAPKPVVIGYASLPLSTHAQFRSEISLPIMKEL
VPHYLQESGKERLDYLEDGKNIFKLRLRLCSSLYPVSERIRDFFLEYDRHTLRTSPPWGS
ELLEAINSLKNVDSTALLQFLYPILNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVD
EAERNAFLVNFVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWF
FLELIVKSMALEQARSFYHNLPSGEDIPPMQLKEGVFRCVVQLYDCLLTEVHERCKKGLS
LAKHLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDHDL
FVEMPGRDPSDRNYLSSILIQEIFLTWDHDDLSMRAKAARILVVLMCKHEFDIRYQKLED
KLYIAQLYFPLVGQILDEMPVFYNLSTIEKREVLIIFLQIVRNLDDETLVKAWEQSIART
RLFFKLLEECLMHFEHRKPADGMLVGSSSRSVIGEGPASPKYSDRLSPAINHYMSEAARQ
EVRGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASALALRESLHPILRQKLE
LWEENLSAAVSLQVLEVSEKFSRTAATKRIATDYGKLDCITSIFMNVFSRNQPLSFWKAL
FPVFNSVFELHGATLMARENDRFLKQIAFHLLRLAVFRNDNIRRRAVIGLQILIRSSFSY
FMQTGRLRVMLTITLSELMSEVQVTQMKLDGTLEESGEARRLRNSLEEMADEAKSSSLLL
ESGLPQNALAAVPEGSAENLWSWSEVKFLSESLLMALDASLEHALLGSVMNVDRYAAAES
FYKLAMAFAPVPDLHIMWLLHLCEAHQEMQSWAEAAQCAVAVAGVVMQALVCRNDGVWSK
DHVSALRKICPMVSSDITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFHQAELFHFCA
SILELVIPVNKSRKAYGQLAKCHTTLTNIYESILEQESSPIPFTDATYYRVGFYGEKFGN
LDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGTTLHVIPDSRQVKADELQPGVCYLQIT
AVDPVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVL
QTEGSFPALVNRLLVIKCESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQS
LQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHF
RLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcatctagtggatatcgatttcggagaataccacaccattccttcgctggt
tccttgaatttagatccactgcttgatgaaaatttggagcagtggccacatttaaatgaa
ctcgtgcaatgctacagaaccgactgggtaaaagatgagaacaagtatggtcactatgaa
agcgtcagcccgacttcatttcagagtcaaatatatgagggtcctgatactgatattgaa
acagaaatgcatcttgcaaatgctagacggtctaagattgaggattcaattgatggtgaa
atccccagcacttccgggacacaactctctgaagataatttctctgacctctcaaatgcc
aaagtctccaagcattttggtgaatcccctctaccgacttatgaaccagtttttgactgg
gaaaatgaaagatcattaataattgggcaaaggattcctgaagctcatatgtcccagtat
acgagcggtctgaagattgctgtgaaagtcctatcattgtcatttcaagctggactagtt
gagccgttttatggcacaatttgtttatataatagggagcgaagagaaaaactttctgag
gattttattttccatgtattgcctaccgaaatgcaagaagcaagcagttcctatgaaagg
cgttgcatttttcatctagatgctccatcagcatctatttgtctgctaatccaactagaa
aaacctgccactgaagaaggtggagtgtctccttctgtttattcacgaaaggaaccagtt
catctgacagagagagagaaacagaaactacaagtatggtcgcggatcatgccttacagg
gagtccttttcctgggccatcattccactctttgatagtaacatagcttctgtgggtggc
tctgcttctcccagcagccctcttgctcccagcgtctctgcttcaagttcacaagagggt
atcactgagccactttcaaaaattacagcagatggaaagcttggttattcaaatggaaac
tccatcgtcgttgaagtgtctaacttaaacaaagtcaaagaaggatacactgaggaatct
ctccaggatccaaagaggaaggttcataaaccagtaaaaggtgtcttgaaattggaaatc
gaaaaactgccagctagctctactgaagttgaaaatgctttggagagtggtagtttgatc
tatgattctcttgatcatggcgaccatttgaatgattcaacttctatgaaatgccctact
aatggttccttttccaagtctaaatcatctgagatgaaagagcttgttcggaatggttca
gttactcatgaaaatgtggaaaatactgctgatgattttgaagcttttgacttccgcaca
acgacaaggaatgaaccgttcttgcagctctttcactgcttatatgtctaccccttgact
gttagtatgagtcggaaacgaaacatgtttattcgtgttgaactgagaagggacgacaca
gatattcgaaaaccatctctagaggctatgcatccaaaggaaccaggtgtaccacttcag
aaatggtctcacacacaagttgctgtgggggcaagggtggccagctaccatgatgaaatc
aaagtttctttgcctgttatttggacaccatcacatcaccttttgtttactttctatcat
gttgatcttcagacaaaacttgaagcaccaaagccggtggtaattggatatgcttcactt
ccattatcgacacatgcacagttcagatctgagatatccttgccaatcatgaaagaattg
gttcctcattatcttcaagaaagtggcaaggaaaggctggattacttggaagatggaaag
aatatcttcaagcttcgtttacgactatgttcatcattatacccagttagtgagcgcatt
agggattttttcctcgagtatgataggcatactctacggacaagccccccttggggatct
gaacttcttgaggcaatcaatagcttgaagaatgttgattccactgcgttgcttcaattt
ctttatccaatcttaaacatgcttctccatcttattggcaacgggggagaaactcttcag
gttgctgcctttagggctatggttaacattttaacaagggtgcagcaagagtcagttgat
gaagctgagagaaatgctttcctggtaaactttgttgattatgcttttgatgattttggc
ggccgccagccaccagtgtatcctggtttgtccacagtgtggggaagtttggctcgcagt
aaggcaaaagggtaccgcgttgggcctgtctatgatgatgtcttggcaatggcttggttt
tttcttgagttaattgtcaagtcaatggcactggagcaggctcgatccttctatcacaat
cttccatcaggtgaagatatcccgccaatgcaattgaaagaaggtgttttcagatgtgtt
gttcagttgtatgattgccttttaacagaagttcatgaacgctgcaagaaaggtctaagc
ctggccaagcatttaaatagtagtttggctttcttttgttatgatcttttatccatcatt
gagcctcgtcaggtctttgaactggtgtccttatatctcgataaattctctggagtgtgt
caaacggtgctgcatgactgcaagcttacctttctacaaattatatgcgatcacgatctt
tttgttgaaatgcctggacgagatccttctgataggaactatctttcatctatcttaatt
caagagattttccttacatgggatcatgatgacttgtcaatgagggcaaaagcggcaaga
atcttggtggtcctcatgtgtaagcacgagtttgatatccgctaccaaaaactagaggat
aaattatatattgctcaattatattttccccttgttggccagatcctggatgagatgcct
gtcttttacaatctgagtacaattgaaaagcgtgaagtcttgattatatttctgcaaata
gtgcgcaacttggacgatgaaacacttgttaaagcttgggagcagagcattgcccgtacc
agattattctttaaactcttagaagagtgcttgatgcattttgagcataggaaacctgct
gatggcatgcttgttggtagtagttctcgtagtgtgataggggagggacccgcatcccca
aaatattctgacagactttcacctgcaattaaccactacatgtctgaggcagcaagacaa
gaagtcagaggaactccggataatggttatttgtggcagcgggttaactcccaattaagc
tctcctagtcagccatattcattgagagaagccctagctcaagcccagtcctccagaatt
ggagcttcagcactagcattaagggaatccttgcatccaatcttaaggcaaaagctggaa
ctttgggaagagaacctgagtgctgctgttagtcttcaagttttagaagtttctgagaag
ttctcacggactgccgcaacgaagcgtattgctactgattatggaaaacttgactgtatc
acatccatatttatgaatgtgttctcacgaaaccaaccactctctttctggaaagcactg
tttcctgtcttcaacagtgtctttgaacttcatggagctacattgatggcaagagaaaat
gatcgtttcttaaagcaaattgctttccaccttcttcggcttgcagtgtttcgaaatgac
aatatcagaagaagggctgtaattgggctgcagatacttatacggagctcgttctcttat
tttatgcagacgggaagattaagagtcatgctaaccattacattgtcagagttaatgtct
gaagttcaagtaacacaaatgaaacttgatggaacactagaagaaagtggtgaagctcgt
cgtcttcgaaattctttggaggaaatggcagatgaggctaagagttcctccttattactt
gagtctgggctcccacaaaatgcactggctgctgttccagaaggatcagcagaaaacctc
tggtcctggtctgaggtgaaatttctttctgagagtcttcttatggctcttgatgccagc
ctggaacatgcacttctgggttctgttatgaatgtcgacaggtatgcagctgcagagagc
ttttataaactagcgatggcatttgctcctgtaccagatcttcacataatgtggttactg
catctttgtgaagctcatcaggaaatgcagtcttgggctgaagctgctcaatgcgctgtt
gctgttgctggtgtagtgatgcaggcccttgtgtgtaggaatgatggtgtctggagcaag
gatcacgtgagtgcattacgcaaaatatgccccatggtcagcagtgacatcacttctgag
gcttcagcagctgaggtggagggatatggtgcttcaaaactcacagttgactcggctgtg
aagtatttacagcttgcaaataagcttttccatcaggctgagttgttccatttctgtgca
agcattctagaactcgtaatcccagtaaataaaagcaggaaggcatatggacagcttgca
aaatgccacacaacacttactaatatctatgagtccatccttgagcaggaatcaagccct
attcctttcacagacgccacatattatagagttggattttatggtgagaagtttgggaat
ctggacaggaaagaatatgtttatagagagcctcgtgatgtgcgattaggtgacataatg
gagaaattgagccatatctatgagtcgagaatggatggaactacattacacgtaattcct
gattcaagacaggtcaaagcagatgagttgcagcctggagtctgctacctgcaaataact
gcagttgatccagtaatggaggatgaagatttaggaagcagaagggaaaggatattctct
ctttctacaggaagtgtccgtgctcgtgtctttgatcggtttttgtttgatacccctttc
actaaaaatggaaagacccaaggaggcttggaagaccaatggaagcggcgaacagttctg
caaactgagggatcttttcctgcgctagtgaatagactcttggttatcaaatgtgaatcc
cttgagttctccccggttgagaacgcaattggaatgattgaaactaggacagctgcatta
aggaatgaacttgaagagcctagaagctcagaaggcgatcaacttccccgtttgcagagt
ttacagaggattcttcaaggttcagttgcagttcaagttaacagtggagtcctcagcgtc
tgtacagctttcctttctggtgagcctgcaactaggttgcgttcacaggagctacaacaa
cttattgctgcccttcttgaatttatggctgtgtgcaaacgtgctattcgagtacacttt
aggttgatcggggaagaagatcaggatttccatactcagcttgtaaatgggttccagtct
ctcactgcagaactgtcacattatattcctgcaattctttcagagctttag
DBGET
integrated database retrieval system
