Solanum verrucosum: 125836694
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Entry
125836694 CDS
T11474
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sver Solanum verrucosum
Pathway
sver00040
Pentose and glucuronate interconversions
sver01100
Metabolic pathways
Module
sver_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125836694
Enzymes [BR:
sver01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
125836694
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
125836694
NCBI-ProteinID:
XP_049371865
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MSPLAIFFLFLINSSLASNTNYNVQNYGAKSDGETDSSEAFLSAWSAACASTRSSTIYVP
HGNYLIRNAYFNGKTCQSKAITIRIDGTLLAPSDYNVNSDDENWIKFEKVNGVSIYGGTF
DGQGAGLWACKNSNNKNCPDGTTALSFYKSNNIIVSGVTVQNSQMFQILVDKCHNVKLLG
VKVSAPGNSPNTDGIHVKLSSGVSIMNSQIGTGDDCISIGPGNSNLWIEGIACGPGHGIS
IGSLGWKKQELGVQNVTIKTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPI
IIDQNYCPNHESCPHKGSGVKISDITYQDIHGTSATKVAVKLDCSKSNPCSGITLEDVNL
SYNDHPAKASCVNVSGRVSGLEKPANCL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtcccttagcaattttcttcctcttcttaatcaactcatcattagcatcaaatact
aattacaatgtccaaaattatggtgcaaaatccgatggagaaactgattcatcagaagcc
tttttgagtgcgtggtcagcagcctgtgcttctactagatcgtccactatttacgtgcca
catggaaattacttgattcgtaacgcatacttcaatggcaaaacatgccagagcaaagct
attactatacgcattgatgggactctcttagctccatctgattataatgtcaatagcgat
gacgaaaattggataaaatttgaaaaggtcaatggtgtttccatctatggtggaaccttt
gatggtcaaggtgctggtctttgggcttgcaagaactccaacaacaagaattgccctgat
gggactacggcattgagtttttacaaatcaaacaacattatagtgagtggagtaaccgta
caaaatagtcaaatgtttcaaatattggtagacaagtgtcataacgtgaagttactagga
gtaaaggtatcagctccaggaaatagtcccaacactgatggaattcatgtaaaattatca
tcaggagttagtattatgaactcacaaattggtactggagatgattgtatctctattggc
cctggaaattctaacttatggattgaaggcattgcttgtggccctggccatggaataagc
attggaagcttaggctggaaaaagcaagagttaggagtccaaaatgtgacaattaagact
gtaactttcagtggaacaacaaatggtgtgagagtaaaaacttgggcaaggcctagcaat
ggatttgttagaaatgttttgtttcaacatatcgttatggttaatgttaaaaacccaatc
atcatagatcaaaactattgccctaatcatgaaagttgtcctcataagggctcgggcgta
aagataagtgacattacatatcaagatatacatggaacatcggctacgaaagttgcagtg
aaacttgattgtagcaaaagtaatccatgtagcggcataacgcttgaagatgtgaatctt
agttacaatgatcatccggctaaggcttcatgtgttaatgttagtggaagagtttctggt
ttagaaaaacctgccaattgtttataa
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integrated database retrieval system