Solanum verrucosum: 125838509
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Entry
125838509 CDS
T11474
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sver Solanum verrucosum
Pathway
sver03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125838509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125838509
Enzymes [BR:
sver01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
125838509
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
125838509
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
HROB
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
125838509
NCBI-ProteinID:
XP_049373512
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MMGSESLTPPPVEAAAEAAPPPKKQGITKPLSLAGPTEADLQRNEALENFLKESELYESE
EETARREEVLHQIDQIVKSWVKQLTRQRGYTDQMVEDANAMIFTFGSYRLGVHGPGADID
TLCVGPSYVNRDEDFFIILHDILAEKEEVSELQPVPDAHVPVMKFKFQGISVDLLYASIS
LLVVPEDLDISDQSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRR
GVYSNVTGFLGGVNWALLVARICQFYPNALPSMLVSRFFRVYTQWRWPNPVMLCPIEEDE
LGFLVWDPRKNPKDRTHHMPIITPAYPCMNSSYNVSPSTLRVMMDQFQFGNKICEEVELN
KAQWAALFKHYLFFEVYKNYLQVDIVAADNDDLLAWKGWVESRLRQLTLKIERDTNGMLQ
CHPYPNEFVDLSKPCPHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFKQDVSMYAYWRPG
MDIYVSHVRRKQIPPFVFPDGYKRPRQPRNTSHSTPEKVAKGCMSPEERQPKRKQETETV
NVNLGKPGKRASISPQRIGSVSPLGSSCRSDGSSQIIISDESQREFESSCLMDSSDDRSL
HRILRSRSDASPSDSSICTPDSLNYTTSRGSILLGVSREVDLDSSNTKSFPSKEVPGPCE
DICTRDVQTFQVLQNDEKGEILGSLHQDIVGQLNEPCIQTGCAESLERVPVSNSNIHNLT
CEGDISLADRISQLGDGCLSGNGELGNGFAEMSQVECKTKPLSRKGNGTPGWDKLRGCAG
GCNKACVSENLCFMI
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatgggttccgagagcttaacgccgccgccggtggaggcggcggcagaggccgcgcca
ccgccgaagaagcagggaatcacgaagcctttgtctcttgctgggcccaccgaggcagat
cttcaaagaaatgaagcattagaaaattttttgaaggaatctgagttgtatgagagtgag
gaagagacagcaaggagagaagaggtgctgcatcagattgatcagattgtaaaatcatgg
gtgaaacaattgactcgccagagaggctacactgatcaaatggtggaggatgcaaatgct
atgatattcacttttggttcttatcggttaggagttcatggacctggagctgacatagat
acattgtgtgttggtccctcttatgtcaatcgtgatgaagatttttttatcattctgcat
gatattttggctgaaaaggaagaagttagtgaactccaaccagttcctgatgctcatgtc
ccagttatgaaattcaaatttcaaggaatatctgttgatctcctttatgcaagtatatct
ctcttagttgtccctgaagatttagatatctcagatcaatctgtactctacaatgttgat
gaaccaactgttcgaagtctcaatgggtgccgggttgctgatcaaatattgaaactagtt
cctaatgctgagcacttccgcacaactcttagatgtctaaagttttgggcaaaaaggcgc
ggtgtttattccaatgttaccggattccttggcggtgtgaattgggctcttttggttgct
cgcatttgccaattttatcctaatgcactccccagtatgcttgtttctaggttcttcaga
gtttatacacaatggcgttggccaaatccagtgatgctatgcccaatagaagaggatgaa
cttggttttcttgtttgggatcctcgcaagaatccaaaggaccgaacccatcatatgcca
attattactcctgcttacccttgcatgaactctagctacaatgtctccccaagtactctt
cgagtaatgatggaccaatttcagtttggtaacaagatttgtgaggaggtagagttgaat
aaagcacagtgggccgcgctttttaagcattatcttttctttgaggtctacaaaaactat
ctgcaggttgacattgtagcagcagataatgatgatttgctagcttggaaaggctgggtg
gaatcccggcttaggcaactaacactaaagatagagcgggacacgaacgggatgttgcag
tgccatccgtatcctaatgaatttgtagacttatctaagccatgtccacattgtgctttt
tttatgggcttgcagaggaaacagggtgtcaaagtacaagaagggcaacaatttgatatt
cgtggcacagttgatgagtttaagcaagacgtaagcatgtatgcttattggagaccaggc
atggatatctatgtatctcatgttcggaggaagcaaattcctccatttgtctttccagac
gggtataagagaccaaggcaacctcggaatacaagtcatagtactccagagaaagttgct
aaaggctgcatgtctcctgaagaaaggcagccaaagaggaaacaggagactgaaacagtt
aatgtaaatttgggcaagccagggaaacgtgcttctatcagtccgcagaggatcggatct
gtttctcctctaggtagttcttgcagatctgatggatcatcacagataatcatttctgat
gagtcacagagggagtttgagagttcttgcctaatggacagttctgatgatagatcatta
cataggatattgcgcagcagaagtgatgcctctccgagtgacagttccatttgtacacct
gatagtttaaactatacaacgtcaaggggttccatcttattaggagtttccagagaagtt
gatttagatagttctaacacaaaatccttcccaagcaaggaggtgcccggtccgtgtgaa
gacatatgcactagagacgtccaaacttttcaagtcttgcagaatgatgagaagggggag
attttgggatcacttcatcaggatattgttgggcagctcaatgaaccatgcattcagact
ggttgtgcagaaagtctcgaaagagtgcctgtatcaaattccaacattcacaacctcact
tgcgagggtgatataagcttggccgatcggatttcacaacttggggatggatgtctaagt
gggaatggagaattgggtaatggctttgccgagatgtcacaggtggagtgcaaaaccaaa
cctctctctcgcaagggcaatggaaccccaggatgggacaaactcagaggctgtgcagga
ggctgcaataaggcatgtgtttctgagaacctgtgttttatgatttga
DBGET
integrated database retrieval system
