Solanum verrucosum: 125839777
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Entry
125839777 CDS
T11474
Name
(RefSeq) protein argonaute 16-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sver Solanum verrucosum
Brite
KEGG Orthology (KO) [BR:
sver00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sver03019
]
125839777
03036 Chromosome and associated proteins [BR:
sver03036
]
125839777
Messenger RNA biogenesis [BR:
sver03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125839777
Chromosome and associated proteins [BR:
sver03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125839777
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125839777
microRNA pathway
RISC loading complex
125839777
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
125839777
NCBI-ProteinID:
XP_049374733
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MEISEGRESCITPVEEPPPVITSNAEPEGVDQPKRTIMMRPGDGTSGREISLLANHLKVS
IKCPDEIFYHYSVSITSDEKRDVNSKVIRRKIINRLHETYSSEFAGKRFAYDGEKNLYTV
GPLPRNRLEFTVVVEESSARHASESPSDNGSLNHFSKRSKHSLHSKAFLVEIDYAAKIPL
RSVDLALQGVDPENVQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVMSC
RGFHSSFRRTDGGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNLR
VKAKHNNREFKIIGLTDRPCNQQLFSMKVKNGGSPDDGGETLEITVYEYFTKHRNIELSS
SVYMPCLDVGKPKRPNYLPLELCYLVSLQRYTKALSSVQRASLVEKSRQKPRERIKVITD
AVRDYSYDDDPFLVACGISIEKQLIQINGRVLEAPKLKVGNGEEVTPCDGRWNFKNKHLF
NPARIERWAVVNFSASCDTSHLSRELISCGRSKGIHFERPHTLIEEDPQYRRAGAVVRVE
QMFEEIIARLPGHPDFLLCVLPERKNSELYGPWKKKSLTDLGIVTQCISPLKITDRYLTN
VLLKINAKLGGTNSLLAMEHTSHLSLIKDTPTMILGMDVSHGSPGQSDIPSIAAVVGSLY
WPLISKYRAVVRSQSPKLEIIESLYKPLPNGDDEGIMRELLLDFYRTSNGHKPAQIIVFR
DGVSESQFSQLLNLELDQMVKAYNHLGEGGNPKFTLIVAQKNHHTKLFQANAVDNVPPGT
VVDTNIVHPRNNDFFMCAHAGMIGTTKPAHYHVLLDEIGFAPDVLQNLIHSLSYVYQRST
SATSIVAPVRYAHLAAQQFGQFDKFEDHSETSSEQGSVKSIGTTPVTELPRLHKNVSDSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggaaattagtgagggaagagagagttgtattacacctgtggaagaaccgccaccagtt
ataacgtcaaatgcagagccggagggagttgatcagcccaagcgtactataatgatgagg
cctggggatggaacatctggacgcgaaatttctttgctcgcaaaccacctaaaagtttct
atcaagtgtcctgatgaaatattttaccattatagtgtctctataacttctgatgaaaag
agggatgttaacagcaaggtgattagaagaaaaattataaatagacttcacgaaacatac
tcgtctgaatttgctgggaagagatttgcttatgatggagagaagaatttgtacacagtg
ggacctctaccacgcaacagactggaattcaccgtggttgttgaggagtctagtgcacgg
catgctagtgagagcccctcagataatggaagcctcaatcacttcagtaaaaggtctaag
cattctctacattcgaaggctttcctggtggagattgactatgcagctaaaataccatta
aggtctgttgatcttgcccttcaaggagttgatccagaaaatgttcaagatgcattgagg
gttctagacattatattgcgacaacaagctgctaatagaggatgcctcttggttagacag
tcattttttcatgatgactcaaggaacttcacagatgttggagggggtgtaatgagttgc
agggggtttcattccagctttcgtcgaactgatggtggcttgaccttgaacatggatgtg
tctacaactatgatcctatcacctggacctgtaattgattttttgcttgctaaccagaat
gtaaaggagcctcgttatattgattgggcaagagcaaaaagaatgttgaagaatctgaga
gttaaagctaagcacaacaacagagaatttaaaattattggtttgactgacagaccttgc
aatcaacagttattttctatgaaggtcaaaaatggtggtagtccagatgatggaggagag
accctagagataactgtttatgagtatttcactaaacatcgtaacatagaactttcatcc
tcagtttatatgccatgtctggacgttggaaaaccaaaacgaccaaactatctgccactg
gagctgtgttatttggtctcccttcaaagatacacaaaggcattatcatcggtccagagg
gcatctttagttgaaaaatcaaggcagaagcctcgtgaaagaattaaagttataacagat
gctgtgagggattacagctatgacgatgatccctttcttgttgcttgtggaatctcaata
gaaaagcagctgattcaaattaacggcagggtccttgaagccccaaagttgaaggttggt
aacggcgaagaggtcactccctgtgacggcaggtggaattttaagaacaagcatcttttc
aaccctgcacgaattgaacgctgggcagtggtcaacttctctgccagttgtgatacaagt
cacctttcaagggagcttattagttgcggaaggagcaaaggcattcattttgagcgccca
catacgctcattgaggaagatccccagtataggcgagctggggctgtagttcgagtagaa
cagatgtttgaagagataatagctagactgcctggccatcctgatttcctcctctgtgtc
ttgccagagcggaaaaactcagagttatatggaccttggaagaaaaaaagtttgactgac
ttgggaattgttactcaatgtatctctccgttaaagatcactgatcgatatctaacaaat
gtgcttctcaaaataaatgcaaagcttggagggaccaattcattgttggctatggaacat
acctctcatctatcgcttattaaggacactccaacaatgatcctgggaatggacgtctct
catggatctcctggtcaatcagatattccatcaattgctgcggttgtgggatccttatac
tggccattaatatccaagtatagggcagttgtgcgcagtcaatctccaaagttggaaatt
atagaatccttatacaagcctttaccaaatggagacgatgaaggaatcatgagagaacta
cttctggacttctataggacaagtaacgggcataagccagctcaaattattgtcttcagg
gatggcgtcagcgaatcacagtttagtcaacttctgaaccttgagctagatcaaatggtc
aaggcatacaaccatcttggtgagggcggcaaccctaagttcaccttgatcgtggctcaa
aagaatcaccatacaaaactttttcaagctaatgcagttgataatgtaccaccaggtact
gttgtagacacaaatattgtgcatcctagaaataatgattttttcatgtgtgcacatgcg
gggatgattggaacaactaaacctgcacattatcatgtattgcttgatgagattggtttc
gcacctgatgtcttgcaaaatctcatacattcactatcatatgtgtaccaaaggagcacc
agtgcgacctctattgtggctcctgtgcgttatgcacacctagcagcacaacaattcggg
cagtttgacaagtttgaggaccactccgaaacttcgtcagaacagggaagtgtaaaatca
attgggactaccccggtcaccgaactgcccaggttgcacaagaatgtcagcgactcaatg
tttttctgttga
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