KEGG   Solanum verrucosum: 125840939
Entry
125840939         CDS       T11474                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sver  Solanum verrucosum
Pathway
sver03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sver00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125840939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sver03019]
    125840939
   03041 Spliceosome [BR:sver03041]
    125840939
Messenger RNA biogenesis [BR:sver03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125840939
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125840939
Spliceosome [BR:sver03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125840939
SSDB
Motif
Pfam: RRM_1 RRM_7 Astro_capsid_p
Other DBs
NCBI-GeneID: 125840939
NCBI-ProteinID: XP_049375878
LinkDB
Position
Unknown
AA seq 415 aa
MGTKRKSSSSTSRPQPEEQKPKLQPPSSSEEEEEEEEEVEYEEEPEESESEEKSESDLES
DSDGEDEATKRDTIRKILEPFSKDQIIQQFKTAASKNPSILSRVTSFADSDPTHRKIFVH
GLGYDATSDQLLDAFKPYGKIEECKLITDKVTGRAKGYGFVVFETRVGAKRALKEPQKII
GNRTTSCQLAALRSAVTGQDSGGRKIYVGNVGQDVDSEKLRAFFAKFGEIEEGPSGIDSV
SRKFKGFAIFVYKSVEGANKALEEPQKSFDGCQLFCKKFVENLNNAGSSNANQGVQQNEM
SYGFGVTPGILSGASMNGMPLLIGQNMGFGINPLLAPGFNPLFGGIGAGYGINGISPVVI
ASYGSDPALQGLGTYQGAQMWQPSLGGSAAMATITTPAKDSSGAGGVTYPSSLGR
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggggactaagcgaaaatcatcatcttcaacctcaaggccccaacctgaagagcaaaaa
cctaaacttcaacctccatcttcatctgaagaagaagaagaagaagaagaagaagtagag
tatgaagaagagcccgaagaatctgaatccgaagagaaatccgaatctgatctagaatcc
gactccgacggcgaagatgaggcgaccaagcgagatactattcggaaaattcttgaacca
ttcagtaaagatcaaataatccagcaattcaaaaccgcagcttcaaagaatccatcaatt
ctctctcgggtcacatcttttgccgattctgacccgacccaccggaaaatcttcgttcat
ggactcgggtatgatgcaacttcagaccaattgctcgacgcctttaaaccctatggaaaa
atcgaagagtgtaagctgattactgataaggttacaggaagagctaaaggttacgggttt
gtggtattcgaaacacgggtcggggcaaaaagagctttaaaggagccccagaagataatt
gggaatcgtactacttcttgtcagctggctgctttgcgatctgctgtgactggtcaagat
tccggtggccggaaaatttatgttgggaatgttgggcaggatgtggatagtgaaaagtta
cgggcttttttcgcgaaatttggtgaaattgaggaagggccttcagggattgatagtgtt
agtaggaagtttaaggggtttgctatatttgtgtataagtctgttgaaggggctaataag
gcgttggaggaaccgcagaaatcgtttgatgggtgccaattgttttgcaagaaatttgtg
gagaatttgaacaatgctggtagtagtaatgcaaatcaaggtgtgcagcagaatgagatg
agttatggttttggagtgactcctgggatattgagtggcgcgagtatgaatggtatgccc
cttttgatagggcaaaacatgggatttggaattaatccattgcttgcaccaggatttaat
ccgttgtttggagggattggtgctggttatggtataaatggcattagtccggttgtcata
gctagttatggttcagacccagctttgcagggattagggacttatcagggtgcacaaatg
tggcagccttctttaggagggtcagcagcaatggcaacaataactacacccgcaaaagat
tcatctggcgcaggaggggtgacctatccctcgtctctgggccgctag

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