Streptococcus viridans: NCTC3166_00425
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Entry
NCTC3166_00425 CDS
T08046
Symbol
csd
Name
(GenBank) class-V aminotransferase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
svf
Streptococcus viridans
Pathway
svf00450
Selenocompound metabolism
svf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NCTC3166_00425 (csd)
Enzymes [BR:
svf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NCTC3166_00425 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NCTC3166_00425 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
VED66637
UniProt:
A0A447Z2U8
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All DBs
Position
1:376875..378101
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AA seq
408 aa
AA seq
DB search
MIDVEKIRKDFPILDQIVNDEPLVYLDNAATTQKPKVVLEAVNRYYQEDNANVHRGVHTL
AERATASYEGARETVRRFINASSTKEVLFTRGTTTGLNWIGRFAEEILEEGDEVLISIME
HHSNILPWQEACRKTGAKLVYVYLKDGGLDLEDFRKKLTDRTKFVSIAHASNVLGVINPV
QEIAQLAHEKGAVVVVDGAQSVPHMKIDVQTLDADFFVFSGHKMAGPTGIGVLYGKEHYL
NQMSPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNMAGAIGLAAAIDYLEAIGMDAIER
HEQDLIAYVFPKLQAIEGLKIYGSQDLAKRSGVISFNLGDLHPHDLATALDYEGVAVRAG
HHCAQPLIQYLEVPATARASFYLYNTKEDCDKLVEALIKTKEFFNGTF
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgatagatgtcgaaaagattcggaaagatttcccgattttagatcaaattgtgaatgat
gagccgcttgtctatttggataatgcagcgacgacacaaaagccaaaagttgtcttagaa
gcggtgaatcgatattaccaagaggataatgccaatgttcaccgcggggttcatacctta
gccgaacgggcgactgcttcctatgaaggagcaagagaaacggtccgtcgctttataaac
gcttcctcgaccaaagaggtcttgtttacgagagggaccacgacaggtttgaactggatt
ggtcggtttgcagaagaaatcctcgaagagggggatgaggttctcatctccattatggaa
caccattccaacatccttccttggcaggaagcttgtcggaagacaggggcaaagttggta
tatgtctatttgaaagacggtggtctggatctagaggatttccgaaaaaaattgacagat
cgaaccaagtttgtttccatcgcccatgcctccaatgttctcggagtgatcaatcctgtc
caagaaatcgctcaattggcccatgaaaaaggagccgttgtggtagtggatggggctcaa
tcagtcccccatatgaaaatagatgttcaaacattagatgcagacttctttgtcttttct
ggtcataaaatggctggaccgacagggattggagtcttgtatggaaaagagcactatctc
aaccaaatgtcacctgttgaatttggtggggaaatgattgactttgtctatgaacaatca
gcaacctggaaggaactcccttggaaattcgaagcagggactcccaatatggctggtgct
attggtttagctgcggcgattgattatttagaggccattggcatggatgcgattgagcgt
catgagcaagacttgattgcctacgtctttcccaagcttcaagcgattgaagggctgaaa
atctatggctcacaagatttagcgaagcgctctggagtgatttcattcaacctaggcgat
ctgcatcctcatgaccttgcgacagccttggattatgaaggggttgcagttcgggcagga
caccattgtgcccaacccttgatccagtatttggaggttccggcgactgctcgagctagc
ttttatctctacaatacaaaggaagactgcgataagcttgtagaagcgctgataaaaaca
aaggagtttttcaatggcactttctaa
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