Streptococcus viridans: NCTC3166_00511
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Entry
NCTC3166_00511 CDS
T08046
Symbol
cvfA
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
svf
Streptococcus viridans
Pathway
svf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC3166_00511 (cvfA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svf03019
]
NCTC3166_00511 (cvfA)
Messenger RNA biogenesis [BR:
svf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC3166_00511 (cvfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DivIVA
dUTPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
VED66715
UniProt:
A0A3S4L4S1
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Position
1:464668..466275
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AA seq
535 aa
AA seq
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MEFGIAIVFAAIIGLVIGYVGISVKMKASKEAAELTLLNAEQEATNLRGQAEREADLILK
EAKHESSSLKKEALLEAKEEARKYREEVDAEFKSERQELKQLETRLAERSNNLDRKDDNL
TSKEQTLEQKEQSLSDRTKHIDAREEQLQELEKKKEEELEKIASLSQSEARDIILTQTEE
RLSKEIATRIREAEVEVKERSDKVAKDILVQAMQRMAGDFVAEQTNSTVHLPDDGMKGRI
IGREGRNIRTFESLTGVDVIIDDTPEVVTLSGFDPIRREIARMTMESLLKDGRIHPARIE
ELVEKNRLEIDQRIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSIEVAK
LSGIIASELGENATLARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPVVVNTIAS
HHGDVEPESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANGFKGVKTSFALQ
AGREIRIMVSPEEVKDDKLTILAHDIREKIESNLEYPGNIKVTVIRELRAIDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaatttggaattgcaattgtttttgccgcaatcattggtttagtcattggatatgta
gggatctcagtgaagatgaaagcatcgaaagaagctgcagaacttactcttttaaatgct
gaacaagaagcaacgaatttacgtggacaggcagaacgcgaagctgatttgatattgaaa
gaagccaagcacgagtctagttcacttaaaaaagaagcacttttggaggcaaaggaagaa
gccagaaaatatcgagaagaagtcgatgctgagtttaaatcagagcgtcaagaattaaaa
caattagagacccgcttggcggaacgttcaaataatcttgatcgcaaagatgataatctt
acgagcaaagaacagactcttgaacaaaaagagcaaagtctttcagatagaactaaacac
attgatgcgcgtgaagaacaattacaggagctagaaaagaaaaaagaagaagaattagaa
aaaattgcttctcttagtcagtcagaagcacgtgatattatcttaacgcaaacagaagaa
cgactctccaaagagattgcgactcgaattcgagaagcagaagtggaagtgaaagaacgt
tcagataaagttgcaaaagatatcctggttcaagccatgcaacggatggccggggatttt
gtggcagaacagaccaactcaacggttcatttgccagatgatggaatgaagggccggatt
attggtcgcgaagggcgaaatatccgaaccttcgaaagcttgacaggtgtggatgtgatt
atcgacgacacaccagaagtagtcaccttgtcaggatttgatccgattcgtcgggaaatc
gcacgaatgaccatggaaagtctcttgaaagatggtcgaattcatccagctcgtattgaa
gagttggtagagaagaaccgtttggaaattgatcaacgaatccgtgaatacggtgaagca
gctgcttatgaaattggggctccaaatctacatcctgacttgatgaagattatgggacgc
ttgcaatttagaacctcttatggtcaaaatgttttgcgtcactcgattgaggttgctaag
ttatctggtattattgcgagtgaacttggtgaaaatgctaccttggctcgtcgagctggt
ttcctccatgatattggaaaagccatcgaccgtgaggtagaaggtagtcacgtagaaatt
ggaacagagttggctcgtaaatacaaagagcaccctgttgttgttaataccattgccagt
caccatggagacgttgaaccagaaagtgtcattgctgttattgtagcagcagcggatgct
ttaagtgcggctcgtccaggtgcccggagcgagtctcttgaaagctatatcaaacgtctt
caagatcttgaagaaattgcaaatggctttaagggagtcaagactagctttgccttgcaa
gcaggtcgtgaaatccgaattatggtaagccctgaagaagtgaaggatgataagttgacc
atcttagctcatgatatccgtgagaagatcgagtctaacttggagtatcctggtaatatc
aaggtaaccgttattcgtgaattgcgtgccattgattatgcaaaataa
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