Streptococcus viridans: NCTC3166_00873
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Entry
NCTC3166_00873 CDS
T08046
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
svf
Streptococcus viridans
Pathway
svf03410
Base excision repair
svf03430
Mismatch repair
svf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC3166_00873 (recJ)
03430 Mismatch repair
NCTC3166_00873 (recJ)
03440 Homologous recombination
NCTC3166_00873 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
svf03400
]
NCTC3166_00873 (recJ)
DNA repair and recombination proteins [BR:
svf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC3166_00873 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC3166_00873 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC3166_00873 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Toprim
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
VED67058
UniProt:
A0A3S4PZL8
LinkDB
All DBs
Position
1:816858..819071
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AA seq
737 aa
AA seq
DB search
MITSKYEWQFAAPFSDDTFLAQAKKRGLEASAAKLLGERGIQTEEALDRFLEPRLEDLHD
PYLLHDMDKAVDRIRQAIEDYEQILVYGDYDADGMTAASIIKETLEQMGAEVAVYLPNRF
TDGYGPNASVYKYFIEQQGISLIITVDNGVAGHEAIDLAQSMGVDVIVTDHHAMPEVLPD
AYAVIHPEHPNADYPFKHLAGCGVAFKLATALLEEVPLDFLDLVAIGTIADMVSLTDENR
ILVKYGLGVLRQTQRIGLQEMLKLASIAPQDVNEETVGFQIAPRLNALGRLDDPNPAVEL
LTGFDDEEALEIALMIQAKNEERKEIVQAIYDEAKAMVDPSLPVQILAKEGWNPGVLGIV
AGRLLEELHQPIIVLTIDQGKAKGSARSPESVHIFEALDPHRDLFIAFGGHAGAAGMTLE
VDKLPRLTEIFSDYIREKGIDLTAKSTLFVDEELDLEELTLDTLKSFDRLAPFGMDHQKP
VFYIRDFQVESSRTMGAGNSHLKLKIQKGDARFDVVAFGQGHLELEYSQAKNLELVVSLS
VNQWNGQTTLQLMVVDARVEGVQLYNIRGKNAPLPQDIPLFSQLEEGEDSPAIVIDRIPD
DLADLKALFQEQSFQAVYFKNHLDKAYYLTGYGSRDQYAKLYKTLYQFPEFDIRHKLSQL
SDYLKIPQVLLIKMIQIFQELGFVQIENGIMTVNKDAEKKEIASSSIYQDLVQTVKDQEL
MALGSVQEIYDYLTESI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcaaaatatgaatggcagtttgctgcgcccttttcagatgatacttttttg
gcgcaggcaaagaagagaggattagaagcatctgcagccaagttactgggagaacgaggg
atccagacggaagaggcgctggatcgttttcttgaacctcggctagaagatctgcatgat
ccctacctgcttcacgatatggacaaggcagtggatcgcattcgccaagccattgaagat
tatgaacaaatcctagtttatggggactatgatgcggacgggatgacggccgcttctatc
ataaaggaaaccctggagcagatgggggcggaagtagcggtctatctgcctaaccgcttt
acagatggatatggtcccaatgccagtgtctacaagtactttatcgaacagcaggggatt
tccctcatcatcacggtggacaatggagtagctggacacgaagccattgacttggcccaa
agcatgggggtagatgtcattgtgacagaccaccatgccatgcccgaagtcttacccgat
gcctatgctgtcattcaccccgagcatccaaatgccgattaccctttcaaacacttagcg
ggctgtggagttgcctttaaattagcgactgctctcttagaagaggtgcctctagatttt
ctagatttggtagccattgggaccattgcggatatggtcagtctgacagacgaaaaccgc
atcctggtcaagtacggcctaggtgtccttcgtcaaacccaacggatcggcctccaggaa
atgctcaagctggcctccatcgcccctcaagatgtaaatgaagaaacggttggttttcag
attgcccctcgtctcaatgcgctgggtcgcttggatgacccaaatccagcggtcgaactc
ttgacaggttttgatgacgaagaagcgctggaaattgcgctgatgattcaagccaagaat
gaagagcgcaaggagatcgtccaagccatctacgatgaggccaaagccatggttgaccca
agccttcctgtccaaatcttggccaaggaaggctggaatccaggtgtcttagggatcgtg
gccggtcgactacttgaagagctccatcagcccattatcgtcctcaccatagaccaaggc
aaggccaaggggagcgcacgtagccctgaaagtgttcatatttttgaagccctagatccc
catcgggatctctttatcgcctttggaggccatgcgggtgcagctggtatgactctggaa
gttgacaagctccctcgtctgaccgagattttttccgattatattcgtgaaaaagggatt
gacctgacggccaaatctaccctctttgttgatgaggaattggacctagaagagctgacc
ttggataccttgaagagttttgaccgtctcgctccttttgggatggaccatcagaagcca
gtcttttacattcgtgatttccaagtggagtctagtcggaccatgggggctggcaatagc
catctgaagttgaagattcaaaaaggcgatgcccgctttgatgtcgtggcttttggccag
ggccatttggaattggagtactcccaagcgaaaaacttggagttggtggtatccttgtcc
gtcaatcagtggaatggacagaccaccctgcaactgatggtggtggatgcccgtgtagaa
ggagtacagctctataatatccgagggaaaaatgctcctctcccacaagatattcccctc
tttagtcagttggaagaaggggaagattctcctgccattgtcatcgatcgcataccggat
gacctggctgacttgaaagccctcttccaagaacagagcttccaagcggtctattttaaa
aatcacctagacaaggcctattatttgactggctatggtagtcgggatcagtatgccaaa
ctctacaaaacactgtatcagttccctgagtttgatattcgccataagctcagccaacta
tctgactacctcaagattccacaagtcttgttgatcaagatgatccagatcttccaagag
ttgggctttgtccagattgaaaatggcatcatgacggtcaacaaggatgcggagaagaag
gagattgcctctagttccatctatcaggacttggtgcagacggtcaaagaccaggaactc
atggctttaggatctgtgcaagaaatttatgactatttaacggaatcgatttaa
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integrated database retrieval system
