Streptococcus viridans: NCTC3166_01022
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Entry
NCTC3166_01022 CDS
T08046
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
svf
Streptococcus viridans
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
svf03032
]
NCTC3166_01022 (topA)
03400 DNA repair and recombination proteins [BR:
svf03400
]
NCTC3166_01022 (topA)
Enzymes [BR:
svf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC3166_01022 (topA)
DNA replication proteins [BR:
svf03032
]
Prokaryotic type
DNA Topoisomerases
NCTC3166_01022 (topA)
DNA repair and recombination proteins [BR:
svf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC3166_01022 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
phage_tail_N
HypA
Motif
Other DBs
NCBI-ProteinID:
VED67202
UniProt:
A0A447Z4I5
LinkDB
All DBs
Position
1:956913..959000
Genome browser
AA seq
695 aa
AA seq
DB search
MATKTKKKTTTAKKNLVIVESPAKAKTIEKYLGRNYKVMASVGHIRDLKKSTMSIDFENN
YEPEYINIRGKGPLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHILQLDKEDKNRVV
FNEITKDAVKNAFQEPRKIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQS
VALKLIIDREEEINSFQPEEYWTIDGTFKKGTKQFQANFYGMNGKKMKLQNQEDVKAVLS
HLDGKEYIVEKVEKKERKRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEAASFIVDRFGEKYSKHGSRIKNASGAQDAHEAIRPSS
VYNTPEKIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMNVRLGQNGVQYTANGSQVKF
DGYLAIYNDSDKNKMLPDMEEGDTVTQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIQKRYYVKLVAKRFEPTELGEIVNKLIVEFFPDIVNVTFTAEMEGKLDDVE
LGKEEWQKVIDAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPNCHQGQIIERKTKRNRIFYGCNRYPECEFTSWDKPIG
RDCPKCGHYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggctactaaaacaaaaaagaaaactacaacagctaaaaagaatttagttattgtggag
tctcctgcgaaagcgaagacgattgagaagtatcttggtagaaattataaggtcatggcc
agcgtgggtcatattcgtgacttgaaaaaatctaccatgtctattgattttgagaacaac
tacgaaccagagtacatcaatattcgcggaaaaggtcctttgatcaatgatttgaaaaaa
gaggctaaaaaggctaaacaagtctttctcgcaagtgacccggaccgtgaaggagaagcg
atttcttggcacttggcgcatattcttcagttggataaagaagataagaaccgtgtcgtt
ttcaacgaaattaccaaggatgcggtaaaaaacgcctttcaagaacctcgtaagattgat
atggatctggtagatgctcaacaagcgcgtcgtgtcttggaccggattgtagggtactct
atttcaccaattctatggaaaaaggtgaagaagggactttctgctggtcgggtgcagtcc
gttgcccttaaattgatcattgaccgggaagaagaaatcaattccttccaaccagaagaa
tactggacaattgatgggacctttaaaaagggaaccaagcaattccaagccaatttctat
ggaatgaatggcaagaagatgaaactgcaaaaccaggaggatgtgaaagctgttctttcg
catctcgatgggaaagagtatatcgttgaaaaagttgagaaaaaggaacgtaaacgcaat
gcaccgcttccttacacaacttcttccatgcagatggacgcagccaataagattaacttc
cgtactcgtaagaccatgatggtggcgcagcagttgtatgaaggaatcaatattggatca
ggtgttcaaggtttgatcacttatatgcgtacggattcgactcggattagtccagtcgct
caaaatgaagcagctagctttatcgttgatcgatttggagagaagtattccaagcacggt
agccggatcaagaatgcttctggtgcccaagatgcccatgaagcgattcgtccttctagc
gtctacaatacgcctgagaaaattgccaagtacctagacaaggaccagctcaagctctac
accttgatttggaatcgttttgtcgctagccagatgacagcagccgtgtttgataccatg
aatgtccgtttagggcaaaatggggttcaatacacagccaatggtagtcaggtgaagttt
gacggttatttagcaatttacaatgattcggataagaacaagatgctaccggatatggaa
gaaggggataccgtcactcaggtcaatagcaaacctgaacagcactttacccaaccacca
gcccgttattctgaagcgaccttgattaagacgctagaagaaaatggcgtgggccgtcct
tcaacttacgcaccaacgattgagaccattcaaaaacgctattacgtgaagcttgtagcc
aaacgttttgaaccaaccgagttaggggaaatcgtcaataaactaattgttgaattcttc
ccagatatcgttaatgtgaccttcacagcggagatggaagggaaactcgatgatgtcgaa
ctcggaaaagaagagtggcaaaaggtcattgatgccttctacaaaccattctctaaagaa
gtcgcgaaggctgaagaagagatggaaaaaatccaaatcaaagacgaaccagctggtttt
gattgtgaagtctgtggtagcccgatggtgattaaattaggacgttttggtaagttctat
gcttgtagtaattttccagattgtcgtcatactcaagccattgtcaaagaaatcggggtg
gagtgtccaaattgtcaccaaggtcaaatcatcgagcgtaaaacaaagcgcaaccgtatt
ttctatggctgtaatcgctacccggagtgtgaattcacctcttgggacaaaccgattggc
cgtgactgtccgaaatgtggtcactacctagttgagaaaaaagttcgtggtggcgggaag
caggtcgtatgtagcaatggcgactacgaagaagaaaaagtgaaataa
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