Streptococcus viridans: NCTC3166_01203
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Entry
NCTC3166_01203 CDS
T08046
Symbol
trmA
Name
(GenBank) RNA methyltransferase, TrmA family protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
svf
Streptococcus viridans
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
svf03009
]
NCTC3166_01203 (trmA)
Enzymes [BR:
svf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
NCTC3166_01203 (trmA)
Ribosome biogenesis [BR:
svf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NCTC3166_01203 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
TRM5-TYW2_MTfase
N6_N4_Mtase
Methyltransf_31
RrnaAD
Cons_hypoth95
MTS
Methyltransf_15
PrmA
Methyltransf_25
DOT1
TRM
ComR_TPR
PCMT
Motif
Other DBs
NCBI-ProteinID:
VED67381
UniProt:
A0A447Z586
LinkDB
All DBs
Position
1:complement(1139818..1141176)
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AA seq
452 aa
AA seq
DB search
MLKKNEIVDVEIVDLTHEGAGVAKVDGLVFFVENALPGEVIRMRVLKVNKKIGYGKVEEY
LEKSPHRNEELDLAYLRSGIADLGHLAYPEQLKFKAKQVKDSLYKMAGISDIEVPLTLGM
EHPVQYRNKAQVPVRRVNGQVETGFFRKNSHDLMPIEDFYIQDPVIDQVILALRDLIRRF
DLKPYDEKEQSGLVRNLVVRRGHHSGEIMVILVTTRPKIFRVEQLIEQLIKQFPAIKSVM
QNINDQNTNAIFGKEWRTLYGRDYITDQMLGNDFQISGPAFYQVNTEMAEKLYQTAIDFA
ELKEDDVVIDAYSGIGTIGLSVAKHVKEVYGVEVIPEAVENSQKNASLNGITNAHYVCDT
AENAMKNWLKEGIQPTAILVDPPRKGLTDSFIKASAQTGAERIAYISCNVATMARDIKLY
QELGYELKKVQPVDLFPQTHHVECVSLLVKRN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagaaaaatgaaattgtagacgttgagattgtcgatttgacccatgaaggagca
ggagtcgctaaggtcgatggcctggtcttttttgtggagaatgccctgccaggagaagtc
atccgcatgcgcgtgctcaaggtcaataagaagatcggctacggaaaagtagaggagtac
ctagaaaaatctcctcaccgcaatgaagagctagacctggcttatttgcgaagcggtatt
gcggacttgggacacctagcttatccggagcagctgaaattcaaggccaaacaggtcaag
gatagcctctacaagatggcaggaatctctgatatcgaggtacccctgaccttggggatg
gagcatcctgtccagtatcgcaacaaggctcaggtccctgtccgtcgtgtcaatggtcag
gtagagacaggcttctttcggaaaaactctcatgatctaatgccgattgaagacttttat
atccaagatccagtcattgaccaagtaatcttggcgcttcgtgatttgattcgtcggttt
gacctcaagccttatgatgagaaggaacagtctggcctggttcggaaccttgtcgtccgt
cgaggccaccattctggagaaatcatggtcattttggtcaccactcgtcccaagattttc
cgtgtggaacagttgatcgagcaattgatcaagcaattcccagctatcaaatccgttatg
cagaatatcaatgaccaaaataccaatgccatttttggaaaagaatggcgtacgctttat
ggccgagactatattacggatcaaatgttgggaaatgatttccaaatctctggaccagcc
ttttatcaggtcaataccgaaatggcagagaagctctaccagacagccattgactttgca
gagttaaaagaagacgatgtggtcattgatgcctactcaggaatcggaactattggatta
tctgtcgctaagcatgttaaggaagtttatggggtagaagtcatccctgaagctgtggag
aatagccagaagaatgctagtctaaatggcatcaccaatgcccactatgtctgtgacaca
gctgaaaatgccatgaagaattggcttaaggaaggcatccaaccaactgccatcctggtc
gacccaccacgcaagggcttgaccgatagctttatcaaagcaagcgcccaaacaggagct
gaacgcatcgcctatatctcctgtaatgtcgcaaccatggcgcgtgatattaaactctat
caagagttgggatacgaattgaagaaagtccagccggttgacttgtttccacaaacacat
cacgtcgaatgtgtaagcttgttggtaaaacggaactaa
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