Streptococcus viridans: NCTC3166_01711
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Entry
NCTC3166_01711 CDS
T08046
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
svf
Streptococcus viridans
Pathway
svf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
svf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC3166_01711 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
svf03019
]
NCTC3166_01711 (pnpA)
03016 Transfer RNA biogenesis [BR:
svf03016
]
NCTC3166_01711 (pnpA)
Enzymes [BR:
svf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC3166_01711 (pnpA)
Messenger RNA biogenesis [BR:
svf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC3166_01711 (pnpA)
Transfer RNA biogenesis [BR:
svf03016
]
Prokaryotic type
tRNA degradation factors
NCTC3166_01711 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
DUF4404
Motif
Other DBs
NCBI-ProteinID:
VED67877
UniProt:
A0A3S4Q0S0
LinkDB
All DBs
Position
1:complement(1685887..1688103)
Genome browser
AA seq
738 aa
AA seq
DB search
MAKHVFQTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGEIIINPTQEQAERSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLRVDADL
QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTVAYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAVVDFVPRVHGSGLFTRGQTQALSTLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EATIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNRVEDLVEIGDEVDVKVIKIDEKGRVDASMKALLPRPPKPEHAEEKGDKGHRHGDRPR
HHKPKKDFAKDAGEATKE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacatgtgtttcaaacgacttttgcgggtcgtgagttgatcgtagagactggc
caggttgctaagcaagcaaatggctctgttgtggtacgttacggtgagtcaactgtcttg
acggcagccgttatgtctaagaagatggcaactggggatttcttcccgcttcaagtcaac
tacgaagaaaaaatgtatgcagctgggaagtttcctggtggctttatgaaacgggaagga
cgtccttcaacagatgcgactttgacagcgcgtttgattgaccgtccaatccgtccaatg
tttgcggaaggcttccgtaacgaagtgcaagtcatcaatacggtcctttcgtacgatgaa
aatgcatctgcaccaatggcagctatgtttggttcatccttggccctttctatctcagat
attccgtttgacggtccaattgctggggtacaagtggggtatgtggatggggaaatcatc
atcaacccaacgcaagaacaagccgagcgctctcttcttgaattgacagtagctggtact
aagcacgctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttg
gaagctcttctcaaaggacacgaagctgttaaagaattgattgccttccaagaagaaatc
gttgcggcagttggtaaggaaaaagcagaagtggaattgcttcgtgtcgatgctgacttg
caagctgaaatcatcgcagcctacaacagcgaccttcaaaaagcggttcaagtagaagaa
aaattagctcgtgaagctgcaactcaagcagtaaaagaccaagtaacagttgcttacgaa
gaaaaatatgcagaccacgaagaattcgaccggatcatgcgtgatgtagctgaaatcttg
gaacaaatggaacacgcagaagtgcgccgtttgatcacagaagacaaggttcgtcctgat
ggtcgtaaggtcgatgaaatccgtcctttggatgcggttgttgacttcgttccccgtgtg
cacggttcaggtctctttactcgtggacaaactcaggctctttctaccttgactttggcg
ccaatgggtgaaactcaaatcatcgatggcttggatccagagtacaagaaacgctttatg
caccactataacttcccacaatactctgtaggggaaacaggtcgttacggtgcgcctggt
cgtcgtgagattggtcacggtgctcttggcgagcgtgctcttgctcaagtattgccaagc
ttggaagaattcccatatgcgattcgtttggtggcagaagttttggaatcaaacggttct
tcatctcaagcctctatctgtgcgggaacgcttgcccttatggccggtggtgtgccaatc
aaggcgccagtagcagggattgccatgggtctcatttctgacggaaataactataccgta
ttgacagatatccaaggtttggaagaccactttggcgacatggacttcaaggttgcaggt
acgcgtgacgggattacagcccttcaaatggatattaagatccaagggattactgcagaa
atcttgactgaagctcttgctcaagctaaaaaagcgcgttttgaaatccttgatgtgatc
gaagcaaccattccagaagttcgtccagaattggctccaactgctccgaaaattgatact
atcaagattgatgtggacaagattaagattgtcatcggtaagggtggagaaaccatcgac
aagatcatcgctgaaacaggcgttaagattgatatcgacgaagagggaaatgtatctatc
tactctagcgaccaagatgcaatcaaccgtgctaaagaaatcattgctggtttggtgcgt
gaagccaaagtggacgaagtctaccatgccaaagtggtgcgtatcgagaaatttggtgcc
tttgttaacctctttgataagacagatgccctcgtacacatctctgaaatggcttggaca
cgtaccaaccgcgtcgaagatttagtggaaatcggagacgaagtcgatgtcaaggtcatc
aagattgatgaaaaaggtcgtgtagatgcttcgatgaaagctcttcttcctcgtcctcca
aaaccggaacatgcagaagaaaaaggggataagggtcatcgtcatggcgatcgtcctcgt
caccacaaaccaaaaaaagactttgccaaagatgcaggtgaagcaacgaaagaataa
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